Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3063 ATGAATGGCGATTTTGTTACTCAGAAAGATTCTGAACCAGGGTTGAGGGAGATGAACATCGATTTCATTAACTATCAGTTGCAAATGTTCAGCCCCAAAATAGACAAGAAATCCAGGGGCCGCCCTAAAGGCTCTAAGAACAAGCCTAAGGCCGCTTTTCCCCTAGCACCCAGTGACCGCGGCGATGTTATGTCTCCTTACTTTCTTGAAGTCCCTCATGGCAACGACATCATTCGGGCTATTTCCCAGTTTAGCATCCGTAATAACATTGGTCTGTGCGTCCTTAAGGCTTCCGGCACCATCGCTAATGCCTCCTTTAGTCTCTCACATGCTGCTTCTGCTCTTCACATTGTTTGTACTGGCCATCACGCCATCCTCTCCATGTCTACCGCATTTGGCCCTCCCCAATACTCCACTACTGCAATTACACACCTAAAGGCCTTACCGTTAGCCTCGCCACCTTGA 465 0.4839 MNGDFVTQKDSEPGLREMNIDFINYQLQMFSPKIDKKSRGRPKGSKNKPKAAFPLAPSDRGDVMSPYFLEVPHGNDIIRAISQFSIRNNIGLCVLKASGTIANASFSLSHAASALHIVCTGHHAILSMSTAFGPPQYSTTAITHLKALPLASPP 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3063 154 CDD DUF296 66 145 IPR005175 -
Alju02g3063 154 SUPERFAMILY AF0104/ALDC/Ptd012-like 60 140 - -
Alju02g3063 154 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 145 IPR014476 GO:0003680
Alju02g3063 154 ProSiteProfiles PPC domain profile profile. 61 154 IPR005175 -
Alju02g3063 154 Pfam Plants and Prokaryotes Conserved (PCC) domain 66 145 IPR005175 -
Alju02g3063 154 MobiDBLite consensus disorder prediction 34 59 - -
Alju02g3063 154 Gene3D - 65 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3063 Alju-ChrAlju02 47486182 47486646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3063 33 153 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 40.800 4.03e-21 85.1