Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3055 ATGCCGACCATTGCCGGGCGTAAGCTCGTGAAGGAAGCTCTTTCCGAGACAATGGCCATCGTGCCGGAGAAGACAGCTTCCGATGCCCAATCTGACCCCAGCTCCACTCCTCGTAAGAGGAAATTGAGATCCGATGGGCCGCTGATTATGGACAGTCCGATCTCTTCACCCATCAAATGGAAATCGCCTCAACAATGTAGCAGTGAGAGCCCAAATCGCGCTGTCACCGCAAAAGAGATGGTTGCTAATGAAGGTGAAATCAAATCGCATAAATCGCCGACTAAGTCAATGCGGGATAGTTTTACTGATAAACTGAAATGGAACCCCAAAGATGGTGAGCAAGTAAGGACAGTGAAGGAGGCATTGCATGTGTCTACGGCACCATCTACAATTGTCTGCCGTGAAGATGAGCAGAATATGGTTTTCGAGTTCTGCAAGTCATGCGTTGAACATAAGAAGGCCGGGAGTATGTACATATGTGGGTGTCCCGGTACTGGAAAATCGCTATCCATGGAGAAAGTAAAAGAGCTTTTAGTCAATTGGGCTAAACAGGCAGGCTTCCTTCAGCCCGATGTCTTATCTGTGAACTGTACATCACTTGCAAATACATCTGACATTTTCAGCAAGATGCTTGGATTAAACCAACCACGGGGAAAAAAGACTTCAGCTTCTCCCTTACAACAACTTCAGAGCTTGTACTCTCAGAAGTCGTCAAGCCAGAACATGATATTGATGGTGGTTGACGAATTGGATTATCTGATCACCAAAGATAGGGCTGTGCTTCACGATCTCTTCATGCTCACCACTTTCCCATTTTCTAGATGTATACTAGTAGGGATATCAAATGCAATTGACCTTGCTGATCGTTTTCTTCCGAGGTTGAAATCATTGAACTGCAGGCCTATAATAGTAACATTTCGAGCATACTCTAAAGACCAGATCCTCAGCATTCTGAAAGAAAGGCTAAGGGAACTTCCTTACACTGTGTTCCAACATCAAGCACTAGAGCTCTGTGCTCGGAAAGTTGCTGCTGCTTCTGGAGACATGCGAAAGACTCTTTGTATTTGCAGGAGTGCAATTGAGATGCTGGAGGCAGAAATTAGAGAATCTATTGGCCCTTCAGAAATTTCATTGGAAGAGAAAGCTTCGCTGCGACAAAATATAGCTCCTGACCCTGATTATGTGAAAAAACAAGAATTTGATGCTGTAAGGATTGATCATATAGCTCTTGCCTTGTCCAAAACATATAGATCTCCTGTGGTGGATACAATACAATCTCTACCACATCATCAACAGATTATCCTTTGCTCTTCAATGAAACAATTCCGTGGAGCAAAGAAAGATACAATCCTTGGCGAGTTGTACAAATCTTACACGGGCATATGCAAATCATCACTGATTCCTCCTACTGGAATTTTGGAATTTTCAAACATGTGCAGAGTATTGAATGATCAGGGGCTTATTAAACTAGGACCATCACGGGAGGACAAATTGAAGAGGGTGACACTAAACATAGATGAAACTGATATTACCTTTGCATTGCAGGGAATTCGTTTCTTTAGAAACTGTCTTCAATAA 1578 0.4328 MPTIAGRKLVKEALSETMAIVPEKTASDAQSDPSSTPRKRKLRSDGPLIMDSPISSPIKWKSPQQCSSESPNRAVTAKEMVANEGEIKSHKSPTKSMRDSFTDKLKWNPKDGEQVRTVKEALHVSTAPSTIVCREDEQNMVFEFCKSCVEHKKAGSMYICGCPGTGKSLSMEKVKELLVNWAKQAGFLQPDVLSVNCTSLANTSDIFSKMLGLNQPRGKKTSASPLQQLQSLYSQKSSSQNMILMVVDELDYLITKDRAVLHDLFMLTTFPFSRCILVGISNAIDLADRFLPRLKSLNCRPIIVTFRAYSKDQILSILKERLRELPYTVFQHQALELCARKVAAASGDMRKTLCICRSAIEMLEAEIRESIGPSEISLEEKASLRQNIAPDPDYVKKQEFDAVRIDHIALALSKTYRSPVVDTIQSLPHHQQIILCSSMKQFRGAKKDTILGELYKSYTGICKSSLIPPTGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTLNIDETDITFALQGIRFFRNCLQ 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3055 525 MobiDBLite consensus disorder prediction 57 71 - -
Alju02g3055 525 CDD AAA 137 300 - -
Alju02g3055 525 CDD Cdc6_C 428 510 IPR015163 -
Alju02g3055 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 375 IPR027417 -
Alju02g3055 525 Gene3D - 424 515 IPR036388 -
Alju02g3055 525 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 26 523 - -
Alju02g3055 525 Pfam AAA lid domain 330 365 IPR041083 -
Alju02g3055 525 Pfam AAA domain 152 268 IPR003593 GO:0016887
Alju02g3055 525 FunFam Cell division control protein 112 297 - -
Alju02g3055 525 SUPERFAMILY "Winged helix" DNA-binding domain 420 523 IPR036390 -
Alju02g3055 525 Gene3D - 299 423 - -
Alju02g3055 525 FunFam Cell division control protein 427 517 - -
Alju02g3055 525 Pfam CDC6, C terminal winged helix domain 435 513 IPR015163 -
Alju02g3055 525 Gene3D - 111 298 IPR027417 -
Alju02g3055 525 SMART Cdc6_C_2 435 514 IPR015163 -
Alju02g3055 525 MobiDBLite consensus disorder prediction 20 71 - -
Alju02g3055 525 FunFam Cell division control protein 298 424 - -
Alju02g3055 525 PIRSF Cdc6 6 525 IPR016314 GO:0006270|GO:0051301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3055 Alju-ChrAlju02 47356834 47367066 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3055 1 524 Core DNA Replication Machinery Family AT2G29680 57.407 0.0 586