Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3051 ATGGCACTCCTGCAAAATTCACAAGTCGTGTTTCCCAGATGGTTCGCCATTTCAAAACCATCAATCTCCAAGACTCTGTTTCTAAAACTCCCACCGTATCCTATGTTTACTTCACTATCAATGTCGATTCCTGCCTCATCCCCAACTCTTCGCTGCGGCCCCATTTCAGTTTTTTGCTGCAGCTGCAGTTTCAGCTCCAACTCTTCGGCGGAATTCAGTATTCCTCCTCCAGCCAAAGTCTTCATTAAAGGGCTTCCTCTGTCAACTTCTGGAGGACGTTTGGTTAAGGCATTTTCAGAGTTTGGTGAAGTCAGTCAAGTCAAGCTGCTCATGGATAAAGAATCTGGGCAGTTCCTAGGCGTTGCGTACATTTGGTTTGCCAAGGAAGAGTCTGCACATTTGGCTGTGGAAAAGATGAATGGGAAGTTCTTTGATGGCAGGTTTATTTATGTCAGAATTTCGAAGGCTGGATCATCAAACAGCCGGAGGAACACAGTTCCATACAAGTTTTGA 513 0.4522 MALLQNSQVVFPRWFAISKPSISKTLFLKLPPYPMFTSLSMSIPASSPTLRCGPISVFCCSCSFSSNSSAEFSIPPPAKVFIKGLPLSTSGGRLVKAFSEFGEVSQVKLLMDKESGQFLGVAYIWFAKEESAHLAVEKMNGKFFDGRFIYVRISKAGSSNSRRNTVPYKF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3051 170 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 80 149 IPR000504 GO:0003723
Alju02g3051 170 SUPERFAMILY RNA-binding domain, RBD 68 162 IPR035979 GO:0003676
Alju02g3051 170 SMART rrm1_1 79 152 IPR000504 GO:0003723
Alju02g3051 170 CDD RRM_SF 80 152 - -
Alju02g3051 170 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 76 161 - -
Alju02g3051 170 Gene3D - 63 165 IPR012677 -
Alju02g3051 170 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 78 156 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3051 Alju-ChrAlju02 47311623 47314273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3051 75 166 Eukaryotic Initiation Factors Gene Family AT2G36660 34.783 2.44e-09 53.5