Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3046 ATGGGAATTTCTTCAAGTAGCGGAAGAAGAAGCAATTATTTTCACAACCCACATCTTCCAGCACCTTTCTATTACTCGGCAGAATCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCTCAAGGCTATTATTTCACCTCACCCACGCCTTATGCACTGCAAAACAGCAACAACTATGTGCCTCCCCCTCCTCAAACCCATGTCTTCTGTTACTCAAATGCGTATAGCAATTGTTCCAATTATTCTAATTCTATGGTGGTTAGGTTTCAGTATCCCCCGTCTTATTTTCTAAATCATTCTAATGGGTGGGCTCCAATTTATCCTTCGGTGGTTGGTCCTGTCGTCTCGCCGCCGCCCTATGTTGATCATCGAACGGCTAAGAAGATCAGGAACGATGTGAACGTGCATAAGGACACATTGCGGCTGGAGGTAGATGAGCATTACCCTGATCAGCGCTTGGTTTCGTTCGTTTTCGACGCCTTGCATGATGGGAGCATTACTATTATCTACTTTGCAAAGGAGGAGGAGAAATGTAGGTTTGTACCATTGTTTCCCAATGTATTTGAGCCAATAAGAATTCCTTTTCAGAAAGGAATAGGCCAGAAATTTTGTCAGCCCTCAGGAACAGGCATTGACAAAGGGTTTTTCGAGTTGGATGATCTATCAAAACGCTCACTGGGAGATGATGTCTTCCCCCTTGTGATATGTGCTGAAACATGTTTGATAACTTCATCAGCAGATGAAAATCTCGGCAATTCCGTGGTAGATTTTTCTCCTCACATGCAGATTACTCAAGCCTTCGTAGAGAAAGGCAATGGTGATGGTCCTTTACAAGTAAAAGTAGACAGGCAGATTCTGTGGATTGATGGGATCCGTTATGAGTTAAGAGAGTTATATGGAATAGGAGGGTCAGCAGCAGCTGGTTTTGATGACAATGATTCTGGGAAGGAGTGTGTAATATGCATGACTGAACCAAAGGACACAGCCGTATTACCTTGTCGACACTTGTGCATGTGCAGTGGCTGTGCGCAAACTTTGTGGCTTCAATCGAACAAATGCCCAATATGCCGTCAATCTATCGAGGAACTTATAGAAATTAAGATAAAAAATGTTGATTGTTGGGATCTTAGCATTAAAGAGCCTGGAGCTAATATTGCCTTGCAAGTTCAGAATCTTCTAAGCATGTACAGGGCATAG 1194 0.4405 MGISSSSGRRSNYFHNPHLPAPFYYSAESPPPPPPPPPPQGYYFTSPTPYALQNSNNYVPPPPQTHVFCYSNAYSNCSNYSNSMVVRFQYPPSYFLNHSNGWAPIYPSVVGPVVSPPPYVDHRTAKKIRNDVNVHKDTLRLEVDEHYPDQRLVSFVFDALHDGSITIIYFAKEEEKCRFVPLFPNVFEPIRIPFQKGIGQKFCQPSGTGIDKGFFELDDLSKRSLGDDVFPLVICAETCLITSSADENLGNSVVDFSPHMQITQAFVEKGNGDGPLQVKVDRQILWIDGIRYELRELYGIGGSAAAGFDDNDSGKECVICMTEPKDTAVLPCRHLCMCSGCAQTLWLQSNKCPICRQSIEELIEIKIKNVDCWDLSIKEPGANIALQVQNLLSMYRA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3046 397 MobiDBLite consensus disorder prediction 26 44 - -
Alju02g3046 397 Pfam Zinc finger, C3HC4 type (RING finger) 315 361 - -
Alju02g3046 397 SUPERFAMILY RING/U-box 311 362 - -
Alju02g3046 397 FunFam probable E3 ubiquitin-protein ligase LOG2 301 366 - -
Alju02g3046 397 CDD mRING-HC-C3HC5_MGRN1-like 315 356 IPR045195 -
Alju02g3046 397 ProSiteProfiles Zinc finger RING-type profile. 317 356 IPR001841 -
Alju02g3046 397 PANTHER MAHOGUNIN 40 369 IPR045194 GO:0061630
Alju02g3046 397 SMART ring_2 317 355 IPR001841 -
Alju02g3046 397 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 304 366 IPR013083 -
Alju02g3046 397 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3046 Alju-ChrAlju02 47223175 47226814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3046 91 371 C3H Transcription Factor Family AT3G06140 59.028 6.64e-106 315