Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3043 ATGTCTCATATAACTGTGGAAAGGAACAGGAGAAGACAGATGAACGAGCATCTCAAAGTTTTAAGGTCTTTGACCCCTTGCTTCTATATCAAAAGGGGAGACCAAGCATCAATAATAGGGGGAGTAATAGAGTTCATAAAGGAGCTACACCAAGTAGTGGAAGTTCTGGAATCAAAGAAAAGAAGAAGAAAGAGTTTGAGCCCTAGTCCAAGAACACCACTGCCGCTGCCGCCGGCACCACCGGCAACCACCATGAAGGAGGAGGAATCAGTTGGAGCATCAGCAAGCTGTAATTCTTCAGTTGCAGATGTGCAAGTGAAGATCTCAGGCTCAAACGTGATTCTTAGAGTGATTTCCCACAAAATAGTAGGTCAAGTTTCAAAGATAATCAGTGTTCTTGAAAGGCTTTCTTTTGAAGTGCTTCATCTCAATATCAGTAGCATGGAGAATACAGTCCTCTACCAATTTGTTGTCAAGATAGGATTGGAGTGCCAGTTAAGCCTGGAGGAACTAGCAGAGGGAGTACAACAAACTTTCTGCGATCAGAAGATGTTAACTAGTACAGGGTGA 570 0.4316 MSHITVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVVEVLESKKRRRKSLSPSPRTPLPLPPAPPATTMKEEESVGASASCNSSVADVQVKISGSNVILRVISHKIVGQVSKIISVLERLSFEVLHLNISSMENTVLYQFVVKIGLECQLSLEELAEGVQQTFCDQKMLTSTG 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3043 189 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Alju02g3043 189 SMART finulus 4 55 IPR011598 GO:0046983
Alju02g3043 189 Gene3D - 1 65 IPR036638 GO:0046983
Alju02g3043 189 PANTHER TRANSCRIPTION FACTOR FAMA 1 179 IPR044283 GO:0003700|GO:0010052
Alju02g3043 189 FunFam Transcription factor MUTE 1 67 - -
Alju02g3043 189 MobiDBLite consensus disorder prediction 60 90 - -
Alju02g3043 189 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 69 IPR036638 GO:0046983
Alju02g3043 189 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3043 Alju-ChrAlju02 47156993 47158673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3043 1 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 63.235 8.42e-81 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g3043 HLH 1.2e-07 No_clan