Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3033 ATGGATCAAAACCACCATGGTCTAGCAGCAGCAGGAGGAATATCTGGTGCTTCAGCTCAAGGGGCATATGGAATGAATCAATATCAATCTAACCCAATGATGGTTGCTCCTCAACCTCAGTCTCCTTCTCAGGCGGCATCAGGTCTTCCGGCTTCATCTTCTTCCTTCCTGAGAGAGCAACAATATGCTCACCAGTACATGCATCAGCTTCAGCAACAAGAGCTGCGGCAACAACTCCAGAACTTTTGGGCCAACCAGTACCATGAGATTGAGCAGGTTGTTGATTTCAAGAACCATAGCTTGCCTTTAGCTCGGATCAAGAAGATCATGAAGGCTGATGAGGATGTGAGGATGATATCAGCTGAGGCCCCAGTTATATTTGCCAGGGCCTGTGAGATGTTCATCCTGGAGCTAACACTCAGGTCATGGATCAACGCGGAGGAGAACAAGAGGAGGACACTTCAGAAGAATGACATTGCAGCAGCAATCACAAAGACTGATGTGTTTGATTTCCTGGTTGATATTGTGCCAAGAGATGACTTGAAGGATGATTTGCTCTCAGGTGTTCCTAGAGTCCCAACAGCAGCAGCAGAGAATGTTCCTTACTACTACATGCCACCACAGCAAGTTGTGGCCCCTCCTCATTCTCCATATGGAGCTCCGAAAGTGATCATGGGTAGGCCTGTTGTTGATCAAGCTCATTATGGTCAGCCATCAGCACACCCTTCTTTCTCTGCACAAGTGTGGCCACATCAGCAAAACCCATCCAACAACAATTCAGATTCTTGA 789 0.474 MDQNHHGLAAAGGISGASAQGAYGMNQYQSNPMMVAPQPQSPSQAASGLPASSSSFLREQQYAHQYMHQLQQQELRQQLQNFWANQYHEIEQVVDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWINAEENKRRTLQKNDIAAAITKTDVFDFLVDIVPRDDLKDDLLSGVPRVPTAAAENVPYYYMPPQQVVAPPHSPYGAPKVIMGRPVVDQAHYGQPSAHPSFSAQVWPHQQNPSNNNSDS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3033 262 FunFam Nuclear transcription factor Y subunit gamma 65 178 - -
Alju02g3033 262 SUPERFAMILY Histone-fold 74 172 IPR009072 GO:0046982
Alju02g3033 262 MobiDBLite consensus disorder prediction 233 262 - -
Alju02g3033 262 Gene3D Histone, subunit A 62 178 IPR009072 GO:0046982
Alju02g3033 262 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 55 203 - -
Alju02g3033 262 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 100 163 IPR003958 -
Alju02g3033 262 MobiDBLite consensus disorder prediction 238 262 - -
Alju02g3033 262 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3033 Alju-ChrAlju02 46962382 46963170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3033 1 228 CCAAT-HAP5 Transcription Factor Family AT1G08970 57.826 2.39e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Alju02g3033 CBFD_NFYB_HMF 4.9e-17 CL0012