Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3025 ATGCAAATACGTAGAGAACCGAGTGCGACCATTTCAAAGCGAGCTTTTCGCAAACCCGAATCCAATCTCTACTCTCCTCTGACGAGAAGAGAGAGAACGAAGAAGATGGCGATGGTAGCCAGCATTGCCATTATCTTTCTTCTCCTTATGCTTCTTCTGATCATCGTCGTCATCATTTTTGCCTGCAAACCGTGGCGCTTGTTTTCCTCTTCGCGAGCCCGCTTACCCATCAAGGATGGTGATATAGAGAGGCCCCTAGTTGCAGATGATGCAAATGCTTTACGTAATCAGAGTGATGAATTTCCGCGAGACTATGATCTTGAGGGTGGTCCTTTTCGCTCACCACAACCACATGGACTTGTTCATAAGCAAAGGCTTCCTGCTTCTTCTCCTAATGTGCCTCAAGGTGATAGTTTGATTTTAGATGTACCTTCTGATGCTCCAGAAGAAGTTGCATTTGGTCAAACACTTAAGCTTCCGCCAGAACAGTTAGCTGCGATTCAAAGGCATACTAGACTGAATCTTGAAGAGGATAGATTGGAAGACACTGTGCAAAGAGATATCTTAGACAAAAGAAGTTGCCTCACTTTGGAGGTTACCAGTGGTCCTTCTCGTGGAGCTTATTGTTCTGTACAATCAACAAATCCTTCTCATCTACCTCTGACAATTGGAAGAGTTTCTCCAAGTGATTTACTGATAATGGACTCAGAAGTTTCAGGAAAGCACGCTCTAATAAATTGGAATTTAGATAAATTGAAATGGGAGTTGGTAGATATGGGTAGCCTAAATGGAACACTTTTGAATTCTCGGTCAATCAACCATCCAGACACTAGCAACAGGCGTTGGGGTGAGCCATTTGAGATTGCCGATGGAGATATTCTAACTCTTGGAACAACATCAAAAGTCGTTGTCCGTATTTCTTCTCAAGCTGAGCTTCAAATTCCGTTTGGAGTAGGTATGGCATCAGATCCAATGGCTTTGCGTCGAGGAGGGAAAAAGCGACCTATGGAAGATGTTTGCTACTATCAATGGCCTCTTCCTGGGCTGGATCAGTTTGGACTATTTGGCATCTGTGATGGGCATGGTGGAGATGGGGCTGCTAAATCTGCTAGCAAACTTTTCCCTGAAATAGTTGCTCGCATATTATCAGATTCATTAAAAAGAGAGAGGGTTTTATCACTACACGATGCATCTGATGTTCTTAGAGAGGCATTTTCTCAAACAGAAGCAAGCATGAATCACCACTATGAGGGATGTACAGCGACATTGCTTCTGGTGTGGGTTGATGGTGATGGAAATTTCTATGCACAATGTGCTAATGTTGGAGACTCTTCCTGTGTTATGAATGTCAATGGGAAACAGATCAATATGACCAAAGATCATAAGATAGCAAATTCTTCTGAAAGACTCCGAATTGAAGAGAGGGGTGAGCCACTGAAAGATGGCGAAACACGTCTATATGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTTCTCAAACAACAGGATTCCCGGTTTAGTTCAGAGCCTTATACAAGTCAAGCAGTGCATATTGATAAAACAAGCAGGGCTTTTGCCATTCTAGCTAGTGATGGCTTGTGGGATGTCATCAGCATGAAGAAGGCAGTTCAGCTAGTGCTTCAGGTGAGAGAAAGATACTCCTCACTTGCAGAGAATTCTGCAGAAAAGGTTGCTCATTTCTTGTTGGGTGAGGCTAGAACTCTCAGAACAAAGGATAATACTTCTGTAATTTTCTTAGATTTTGATAACATCGCCAAATACTCTTGTAAATCTGAGTCCTAG 1806 0.4275 MQIRREPSATISKRAFRKPESNLYSPLTRRERTKKMAMVASIAIIFLLLMLLLIIVVIIFACKPWRLFSSSRARLPIKDGDIERPLVADDANALRNQSDEFPRDYDLEGGPFRSPQPHGLVHKQRLPASSPNVPQGDSLILDVPSDAPEEVAFGQTLKLPPEQLAAIQRHTRLNLEEDRLEDTVQRDILDKRSCLTLEVTSGPSRGAYCSVQSTNPSHLPLTIGRVSPSDLLIMDSEVSGKHALINWNLDKLKWELVDMGSLNGTLLNSRSINHPDTSNRRWGEPFEIADGDILTLGTTSKVVVRISSQAELQIPFGVGMASDPMALRRGGKKRPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIVARILSDSLKRERVLSLHDASDVLREAFSQTEASMNHHYEGCTATLLLVWVDGDGNFYAQCANVGDSSCVMNVNGKQINMTKDHKIANSSERLRIEERGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYTSQAVHIDKTSRAFAILASDGLWDVISMKKAVQLVLQVRERYSSLAENSAEKVAHFLLGEARTLRTKDNTSVIFLDFDNIAKYSCKSES 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3025 601 CDD FHA_PP2C70-like 195 305 - -
Alju02g3025 601 Gene3D - 325 599 IPR036457 -
Alju02g3025 601 ProSiteProfiles PPM-type phosphatase domain profile. 317 589 IPR001932 -
Alju02g3025 601 PANTHER PROTEIN PHOSPHATASE 2C 313 586 IPR015655 GO:0004722|GO:0006470
Alju02g3025 601 FunFam Protein phosphatase 2C 70 190 324 - -
Alju02g3025 601 ProSiteProfiles Forkhead-associated (FHA) domain profile. 221 272 IPR000253 GO:0005515
Alju02g3025 601 MobiDBLite consensus disorder prediction 98 119 - -
Alju02g3025 601 Pfam Protein phosphatase 2C 328 582 IPR001932 -
Alju02g3025 601 SUPERFAMILY PP2C-like 330 591 IPR036457 -
Alju02g3025 601 CDD PP2Cc 329 589 IPR001932 -
Alju02g3025 601 SMART PP2C_4 311 587 IPR001932 -
Alju02g3025 601 ProSitePatterns PPM-type phosphatase domain signature. 354 362 IPR000222 GO:0043169
Alju02g3025 601 SUPERFAMILY SMAD/FHA domain 194 305 IPR008984 GO:0005515
Alju02g3025 601 SMART FHA_2 220 272 IPR000253 GO:0005515
Alju02g3025 601 FunFam Protein phosphatase 2C 70 325 596 - -
Alju02g3025 601 Gene3D - 190 324 - -
Alju02g3025 601 Pfam FHA domain 222 297 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3025 Alju-ChrAlju02 46805293 46825672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3025 36 590 PP2C-type Phosphatase Gene Family AT5G19280 57.385 0.0 644