Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2996 ATGACTAGACCCTGGACCGTTCTTGGAATTGGAAAGAAAAGAAGAAGCACAGTTTGGCTCAACCTCCGTGAGGTGGACAAAGCCGTGATTTCCAACTCAGAAAAGATCTGCCATTCTTTCTCTCTCCTTCCGCGTGTGAAGTGGCCGTGGATCGCTTGCACACCTTCTTCAGCTCATGAAAAATCTGCAGAAATTGAAGTATTTCTTTTGTATTCAGCTAAATTGAGGAATAATAGAGTTTTTCAAATTTCTCTCTGCATTACTATTGGACATCAACGAACTTATTAAGAGATGGCAAATCGACTGAAGGAAGATGAGAGAAATGAGCGAATAATTCGAGGTCTTCTCAAACTCCCAGCGAATCGAAGATGTATTAATTGCGACAGTCTGGGGCCACAATACGTGTGCACAAATTTCTCAACGTTTGTTTGCACAAACTGTGGTGGGATACACCGGGAATTTACACATCGAGTAAAGTCAATATCTATGGCCAAGTTCACTTCACAAGAAGTTCTTGCACTTCAGGAAGGAGGAAATCAGCATGCAAAAGAAGTTTATTTTAAAGAATGGGACCCGAAAAATCATTCTCTTCCTGATAACAGTAATGTTGGCAGGCTCCGCAGCTTTATTAAACAAGTTTATGTGGATAAAAAGTTCACTGGTGAGAGGACCTATGACAAATCACAGAGAGTAAATGCAGGTGACAAGGATCATTTCTCAGAAAACTCAAGAGTTCAATCATATCAGGGTGGTCCAAAAAGCCTTCCATATGACGAAACACATAAACGCCGGTATAGTGACAGCTCTAGTCCGGGCGGGAGAAGTCCTGGGTATGATCAAGAAAGTAGGCAGTACGGTAATGACAAGAGAAGTCCTAGTCATCCTCCGATTATCAATGATTGGCGTCGAGAAGATAGATTTGGAGATGGAAGGAGGTTTGAAGGTCGTAGAGCATCTGATGGAGATTATAAGCTGGAAGGTCAATTGCCTGGGCAAGCCAACAACCTGGATTCTTCAAGTCCACCTGTGGTTCGGTCTGTTAGAGATATTTTGGGAGAAAATGCGGTGCTTCCTCAAATGAGTAGACCGCCTGAAACAAATAGTAAGAAAGCTAATGATGGCTCAGCTATCACACAGAGGACTGTATCTTCCAGTAGCTTGGCATCCAGCATTGGAAACCCTGCAGAAGTTAAGCTTGAGACTACTAAGAGCCTTATTGATTTTGATGCTGAGCCTGAGCCTCCTATAGCTCCAGCGATTCCTCGCGCACAACAACTGACTGCCCAATCCATTGTGGAGCAACCAAATTCCAGCGATGTCAACAATTGGGCCTCTTTTGATGTGGCCCTAGAAGCAAAAGCAACTCAAACTCCTTCAAATGTAAATACAATAGAATCCATGCTTTCCCAATTGTCAGTATCATCATCATTACATGCTCCTCAAGTCCAACATAGTTCCAGCGTCGTAACACCTATTCCTTGGAGCAGTATGACATTACAAAGAACTGGGAACTTATTTGTTTCACCTGCGGGGCCTACACAAGAACCGTCTCTTACTGCTACTGCTGTTGGAGCTGCAACTATTAGCAGCTTCACGACTTTTCCATCCAGTGGTGCTTCAGCATGGCAGCATCCGCAGCCTTTGTTCCCTTCCTATGTTGGTCAGTCACTGACTCATCAATCTGCACAACCACCAGTAGGAGCACTGAAAAATCAGCCATGGAGTATACCTTCAGCGCCAACAATACAAGGCCATCCAAGCATGTCACTGCCACATGTGTCCCATCTTATCTCTAAGCCTGCAACTGAGACTAGCTCCAGTGCGGCTTCAGGACTGTCCATAGAAGTAAAATCAGGTGGAAGAAAAGAACTTCCTGAGAATCTTTTTACTGCAAGGTATTCTTCCTTCCCTGCTGCAATTCCAGGGTGGCAAATGGTTCCTCCTCATGGCATGGGAATGTTAATGCCATATAATACTGTGCCCATGCCAAGTCTTCAGCGACCATCAAAATCAACAAATCCATTTGGTATTGGCAGTGAACCACCTTCAGTTCAAACCACAACTTTTTTCGTGAGACCATCCTTGCCAAGTGTATCAACTTCAGGTTTAATGCCTTCTTCAAGCCTAAGTAACCCATCACTTGCGTGGAATCCACCTGGTTACGGATTAGTGCTGCCCCAACAAACACAACCTCATCCACCAGCAACTGCAACAAGGCCTTACATAGGGCAACAAGTGCAAAATAACGTGGCAATGCCACGGTCTGAGGGAGCTGCTTTTGGCTTCTCAAGCTTAGATCAGCGTCTGGCCAGTACATTCTCAGCCCCTGCTTCTTCAAATCTCTCTTCTGCAGGAAGGAATCCATTTGGATGA 2373 0.4458 MTRPWTVLGIGKKRRSTVWLNLREVDKAVISNSEKICHSFSLLPRVKWPWIACTPSSAHEKSAEIEVFLLYSAKLRNNRVFQISLCITIGHQRTYXEMANRLKEDERNERIIRGLLKLPANRRCINCDSLGPQYVCTNFSTFVCTNCGGIHREFTHRVKSISMAKFTSQEVLALQEGGNQHAKEVYFKEWDPKNHSLPDNSNVGRLRSFIKQVYVDKKFTGERTYDKSQRVNAGDKDHFSENSRVQSYQGGPKSLPYDETHKRRYSDSSSPGGRSPGYDQESRQYGNDKRSPSHPPIINDWRREDRFGDGRRFEGRRASDGDYKLEGQLPGQANNLDSSSPPVVRSVRDILGENAVLPQMSRPPETNSKKANDGSAITQRTVSSSSLASSIGNPAEVKLETTKSLIDFDAEPEPPIAPAIPRAQQLTAQSIVEQPNSSDVNNWASFDVALEAKATQTPSNVNTIESMLSQLSVSSSLHAPQVQHSSSVVTPIPWSSMTLQRTGNLFVSPAGPTQEPSLTATAVGAATISSFTTFPSSGASAWQHPQPLFPSYVGQSLTHQSAQPPVGALKNQPWSIPSAPTIQGHPSMSLPHVSHLISKPATETSSSAASGLSIEVKSGGRKELPENLFTARYSSFPAAIPGWQMVPPHGMGMLMPYNTVPMPSLQRPSKSTNPFGIGSEPPSVQTTTFFVRPSLPSVSTSGLMPSSSLSNPSLAWNPPGYGLVLPQQTQPHPPATATRPYIGQQVQNNVAMPRSEGAAFGFSSLDQRLASTFSAPASSNLSSAGRNPFG 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2996 790 PANTHER ARFGAP/RECO-RELATED 98 790 IPR044820 GO:0005096
Alju02g2996 790 MobiDBLite consensus disorder prediction 226 242 - -
Alju02g2996 790 MobiDBLite consensus disorder prediction 360 389 - -
Alju02g2996 790 SUPERFAMILY ArfGap/RecO-like zinc finger 108 220 IPR037278 -
Alju02g2996 790 MobiDBLite consensus disorder prediction 553 588 - -
Alju02g2996 790 ProSiteProfiles ARF GTPase-activating proteins domain profile. 109 227 IPR001164 GO:0005096
Alju02g2996 790 CDD ArfGap_AGFG 109 219 - -
Alju02g2996 790 SMART arf_gap_3 109 227 IPR001164 GO:0005096
Alju02g2996 790 Pfam Putative GTPase activating protein for Arf 110 221 IPR001164 GO:0005096
Alju02g2996 790 MobiDBLite consensus disorder prediction 295 323 - -
Alju02g2996 790 MobiDBLite consensus disorder prediction 226 389 - -
Alju02g2996 790 FunFam Arf-GAP domain and FG repeat-containing protein 1 98 232 - -
Alju02g2996 790 Gene3D Arf GTPase activating protein 98 232 IPR038508 -
Alju02g2996 790 MobiDBLite consensus disorder prediction 553 604 - -
Alju02g2996 790 PRINTS HIV Rev interacting protein signature 158 179 IPR001164 GO:0005096
Alju02g2996 790 PRINTS HIV Rev interacting protein signature 140 157 IPR001164 GO:0005096
Alju02g2996 790 PRINTS HIV Rev interacting protein signature 121 140 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2996 Alju-ChrAlju02 46045239 46051321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2996 109 219 C2H2 Transcription Factor Family AT4G05330 34.188 2.51e-11 63.9