Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2993 ATGAAGAAGAAGGTCTATTTCTCTCTTCTTCTCATTGCCTTCTTCCTAGGCGCAATCTCTATCTCTGCTTCCGCCGATGTCCCCATTACCAGCCATGGAGCTCTCACTGACACCGAGGTCATGTACATCAAGCAACGTCAACTTCTTTACTACAGAGACGAGTACGGAGACAGAGGCGAAGAAGTCACCGTCGATCCTTCTATAGTTTTCGAGAATAATCGCATTAGAGATGCTTATAAAGCTTTACAAGCTTGGAAGCAAGCCATTCTTTCCGATCCGCAGAATTGTACTCTCAATTGGGTTGGTAGCAATGTCTGTAACTATAGTAATGTTTTCTGTGCTCCGGCGTTGGACAACCCTAAGATTCGTACGGTTGCCGGCATTGATCTCAACCACTGTGACATTGCTGGATACTTACCGGAAGAGCTTGGACTACTCACGGATCTTGCTCTCCTCCACATCAACACGAACAGGTTCTGTGGTACTGTTCCTCACAAGTTTGATAGACTGAAACTTTTGTTTGAACTGGATCTCAGTAACAATAGGTTCGCTGGAAAGTTCCCTACGGTGGTTCTTAGGCTTCCCTCCCTCAAGTTCTTGGATCTGAGATTCAATGAATTTGAAGGGACAGTGCCTAGAGAGCTTTTTGACAAGGATCTGGACGCGATCTTTATAAACAACAATCGTTTTGTGTTCGATCTTCCTGACAATTTTGGGAACTCTCCGGTGTCGGTCATTGTCGTCGCCAACAACAAGTTCCATGGCTGTCTCCCGGCAAGCTTGGGCAATATGACGAACCTGAACGAGATTATTCTGTTGAATAATGCCCTCCGTTCATGCTTGCCTTCAGAGATTGGGTTACTGAAGAACTTGACAGTGTTTGATGTGAGCTTCAATCAGCTCTTGGGTCCCTTGCCAGACAGCATTGGAGGCATGGTGAGTCTTGAGCAGTTGAATGTCGCTCACAATTTGCTTTCTGGGAAGATTCCAGGGGGCATTTGTATGCTGCCAAATCTACAAAACTTCACATATTCATATAACTTCTTTACTGGTGAGCCACCGTCGTGCCTCCGCTTGCCATCGTTCGATGATCGGAGAAACTGCTTGCCGGCGAGGCCATTACAGCGCTCAGCGGCACAATGCAAGGCTTTCTTGTCAAAGCCTGTAGACTGTAATTCGTTTAAATGTAAGCCATTTGTCCCGTCGCTTCCTCCACCTCCAAATCCTTCCCCTCCGATTCCGGTACCTTCCCCACCACCCGTGGTAGTACCTTCACACTCTCCGCCTCCACCTTCACCTCCACCTCCGGTGTATTTGCCCCCACCTCCGCCGGTTTATTCACCACCTCCACCTCCACCAGTCTACTCTCCGCCTCCTCCTCCACCTTCACCACCTCCACCGTCTCCTCCCCCACCGTCACCTCCTCCGCCAGTATATTCTCCACCCCCGCCACCACCGTCACCTCCCCCTCCTTCACCACCACCACCGTCACCTCCCCCTCCTTCACCACCACCACCATCACCACCCCCGCCAGTCTATTTACCACCACCACCACCACCGTCACCTCCACCTCCTTCTCCACCTCCACCACCCACTCCAACGCCACCATATTGCGTCCGTTCTCCGCCTCCGCCGCCGCCACCAAATTCACCCCCACCACCACCACCGTCTCCTGTATTTTACCCGCCACCAACTTACAGCTCGCCTCCACCTCCTCATCACTCGCCTCCACCACCTCCTCACTCTCCTCCACCTCCTCCTCACTCACCTCCGCCGCCTATTTATCCCTATTTATCACCGCCGCCACCTCCTCCAGTCCATTCTCCTCCTCCCCCTGTCCATTCACCACCCCCACCATCTCCCCCACCTTGTATAGAACCACCTCCACCCCCACCGCCTTGTGAAGAGCCGCCACCACCTTCTCCCACACCTTATTTACCACCTCCATCCCCATCTCCTCCACCACCGCCCCCTGTTCAGTACAGTTCGCCGCCGCCACCACCAGTCCATTACAGTTCTCCCCCACCACCAGTATACCATTCTCCACCACCTTCACCTCCGCCTTGTGAAGAAACACCGCCTTCTTCACCCCCACCTCCACCGCTCACATACGAAAACTCTCCACCTGCTCCTGTATATGAAGGTCCTTTGCCACCTGTCGTCGGAGTCTCTTACGCATCTCCACCTCCACCACCCTTCTATTGA 2205 0.5261 MKKKVYFSLLLIAFFLGAISISASADVPITSHGALTDTEVMYIKQRQLLYYRDEYGDRGEEVTVDPSIVFENNRIRDAYKALQAWKQAILSDPQNCTLNWVGSNVCNYSNVFCAPALDNPKIRTVAGIDLNHCDIAGYLPEELGLLTDLALLHINTNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPTVVLRLPSLKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFDLPDNFGNSPVSVIVVANNKFHGCLPASLGNMTNLNEIILLNNALRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDSIGGMVSLEQLNVAHNLLSGKIPGGICMLPNLQNFTYSYNFFTGEPPSCLRLPSFDDRRNCLPARPLQRSAAQCKAFLSKPVDCNSFKCKPFVPSLPPPPNPSPPIPVPSPPPVVVPSHSPPPPSPPPPVYLPPPPPVYSPPPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPVYLPPPPPPSPPPPSPPPPPTPTPPYCVRSPPPPPPPNSPPPPPPSPVFYPPPTYSSPPPPHHSPPPPPHSPPPPPHSPPPPIYPYLSPPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPPPCEEPPPPSPTPYLPPPSPSPPPPPPVQYSSPPPPPVHYSSPPPPVYHSPPPSPPPCEETPPSSPPPPPLTYENSPPAPVYEGPLPPVVGVSYASPPPPPFY 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2993 734 Gene3D Ribonuclease Inhibitor 240 369 IPR032675 -
Alju02g2993 734 SUPERFAMILY L domain-like 79 362 - -
Alju02g2993 734 FunFam Leucine-rich repeat extensin-like protein 1 79 240 - -
Alju02g2993 734 Gene3D Ribonuclease Inhibitor 78 239 IPR032675 -
Alju02g2993 734 MobiDBLite consensus disorder prediction 449 734 - -
Alju02g2993 734 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 605 - -
Alju02g2993 734 FunFam Leucine-rich repeat extensin-like protein 5 241 380 - -
Alju02g2993 734 PRINTS Proline rich extensin signature 449 466 - -
Alju02g2993 734 PRINTS Proline rich extensin signature 400 421 - -
Alju02g2993 734 PRINTS Proline rich extensin signature 429 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2993 Alju-ChrAlju02 46014749 46016953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2993 24 396 Leucine-rich Repeat extension Gene Families AT3G24480 77.540 0.0 640
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g2993 02 46014749 46016953 Alju02g2993 02 46014749 46016953 ECH