Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2987 ATGCCTCGTTTTAGCTCGGTGCATACCCAAAACCCTAACGAATTCGCGTTTTATATCCATCCTTCATATGCGTTTCTGCCGAATCGCTTATCTGTTCCTATATTAGCATACATGGACAATATGGTGGAAGATGATGCCACGTACCCTCGAAAGCCCTACGCTTCGAACCGCCCTAACTATTCCCATCGCCAAGAGCATTTGGTTCGCTCCACCCCGTATCACCGCCCAGTGATCAGTCGATACGATGAGGACGGTGAAGATGAAGAAATGGATGAATATGACGTAGGGCATGACCTGGAGGACGACGATGATGGGGAGAATGGTTATGGTATGAATATTGATGGCGATGACGAGTTTGAGAGAAACGCGAAGAAAAGGAAATTGCGGAATCCGTCTGTTTCGAACTTTGAGTTGGCACCTCACGGGAAGTTTTCACACGGGAATCGAAGCCTATCAGATGAATGGACTGAGCATGCGACGTTTGTTCTGTTAGAGGTTTGGGGAGACAAATTTCTTCAACTTGGGAGAAAGAGCTTGAGGTCTGAGGATTGGCATGATGTGGCCGAGAAGTTTTCGGAGGAGCTGAAGATGGAGAGGACTGTGGCACAGTGTAGGAACATGTTGGACAAACTGAAAAGAAGGTACAAGAAAGAGAAAGCGAAAATGGATGAAATGGGGTTGAATTCTAGTAAATGGGCTTATTTTAAGAAGATGGATATGTTAATGGCTTCATCAGCGAGGCAAGAATATGGACTTTCCTGTGGAATGGATTCCGGGGAGTATGTTTTCATGAATACAAGGGTTTATTTAGATCGATCAAATGGGTTGGATGAGATGAGAGATAGCCCTGGGGAGTCGGAGACGTCTGAAGATGATTCCGATGGGCCTCCGCTGAGGAGGACTAGGATTGTAGACAATGATGATGGGGAAGAGTCTTCCTTTAGGGAATTGGCGGATTCCATTCAGAAGTTTGGTAAAATATATGAGAAAATTGAGAATCGTAAGAGGCGGCAGATGATGGAGTTGGAGAAGATGAGACTGGATTTTAATAGGGAGTTAGAGCTGCAGAAGAAGCAGATTTTGGAAAGAGCTCAGGCTGAAATTGCAAGCTTGCAAGAAGGAGATGAGGAGGATTCCGACACGTCTACAGAGAATGTCAGTGAATGA 1167 0.4542 MPRFSSVHTQNPNEFAFYIHPSYAFLPNRLSVPILAYMDNMVEDDATYPRKPYASNRPNYSHRQEHLVRSTPYHRPVISRYDEDGEDEEMDEYDVGHDLEDDDDGENGYGMNIDGDDEFERNAKKRKLRNPSVSNFELAPHGKFSHGNRSLSDEWTEHATFVLLEVWGDKFLQLGRKSLRSEDWHDVAEKFSEELKMERTVAQCRNMLDKLKRRYKKEKAKMDEMGLNSSKWAYFKKMDMLMASSARQEYGLSCGMDSGEYVFMNTRVYLDRSNGLDEMRDSPGESETSEDDSDGPPLRRTRIVDNDDGEESSFRELADSIQKFGKIYEKIENRKRRQMMELEKMRLDFNRELELQKKQILERAQAEIASLQEGDEEDSDTSTENVSE 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2987 388 Coils Coil 201 228 - -
Alju02g2987 388 Coils Coil 328 359 - -
Alju02g2987 388 MobiDBLite consensus disorder prediction 366 388 - -
Alju02g2987 388 MobiDBLite consensus disorder prediction 274 315 - -
Alju02g2987 388 MobiDBLite consensus disorder prediction 49 68 - -
Alju02g2987 388 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 145 375 IPR044823 -
Alju02g2987 388 Pfam Myb/SANT-like DNA-binding domain 153 240 IPR044822 -
Alju02g2987 388 MobiDBLite consensus disorder prediction 371 388 - -
Alju02g2987 388 MobiDBLite consensus disorder prediction 292 315 - -
Alju02g2987 388 Gene3D - 155 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2987 Alju-ChrAlju02 45887022 45888295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2987 153 379 Trihelix Transcription Factor Family AT1G54060 31.599 5.71e-19 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju02g2987 Myb_DNA-bind_4 9.3e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g2987 02 45887022 45888295 Alju02g2987 02 45887022 45888295 ECH