Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2985 ATGTTTGCTGGTTTATCACCTTCCTTTGAGGCCATTTCCGTCAATCTCGTTCAGAATTGTGATTCTTCTCGCCTGAGAATGCCAAGCCGATCAACCGGAACCATAACCCAAGACTGGGAGCCGGTGGTTCTGCACAAGAACAAACCCAAGGCCCAGGACCTGCGCAACCCTAAGGCCGTGAATCAGGCACTCCGATCAGGAGCTGAGGTTCAAACGATCAAGAAGTACGACGCCGGTTCGAACAAGAAAAATGCTCCGGCCGTCTACGCGAGGAAGCTGGATGAAGAAACCGAGCCAGCGGCTCTGGAAAAAGTAAGAACAGAGGTGAGGACAGCCATGCAGAAGGCTAGATTGGAGAAGAAGATGAGCCAGGCGGATCTTGCGAAGCAGATCAACGAGCGACCGCAGGTGGTTCAGGAGTACGAGAACGGGAAAGCAGTTCCGAATCAGGCCGTGCTGGCGAAGATAGAAAGAGTTCTCGGCGTGAAACTCAGAGGAAAGATCGGCGGCAAGTGA 516 0.531 MFAGLSPSFEAISVNLVQNCDSSRLRMPSRSTGTITQDWEPVVLHKNKPKAQDLRNPKAVNQALRSGAEVQTIKKYDAGSNKKNAPAVYARKLDEETEPAALEKVRTEVRTAMQKARLEKKMSQADLAKQINERPQVVQEYENGKAVPNQAVLAKIERVLGVKLRGKIGGK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2985 171 Coils Coil 113 133 - -
Alju02g2985 171 ProSiteProfiles Cro/C1-type HTH domain profile. 113 167 IPR001387 -
Alju02g2985 171 Pfam Multiprotein bridging factor 1 37 105 IPR013729 -
Alju02g2985 171 SMART mbf_short4 112 167 IPR001387 -
Alju02g2985 171 FunFam Multiprotein bridging factor 1 97 170 - -
Alju02g2985 171 Gene3D - 98 171 IPR010982 GO:0003677
Alju02g2985 171 SUPERFAMILY lambda repressor-like DNA-binding domains 108 164 IPR010982 GO:0003677
Alju02g2985 171 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 37 167 - -
Alju02g2985 171 CDD HTH_XRE 114 164 IPR001387 -
Alju02g2985 171 Pfam Helix-turn-helix 114 164 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2985 Alju-ChrAlju02 45840285 45840800 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Alju02g2985 MBF1 6.3e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g2985 02 45840285 45840800 Alju02g2985 02 45840285 45840800 ECH