Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2947 ATGTACAAGTCTCAGGATCAACGGCAACGATCTGCTAAACCGGCCACCATCCATGCCTACGCTCAATCTGGCGACCTCGTTGCCTTCCAGAGGCTACTTCGAGAGAATCCTTCTCTTCTCAACGAGAGAAACCCTGTTATGGCTCAGACTCCACTTCATGTTTCTGCTGGCCACAATAGGACTGATATAGTTAAATTTCTTCTCAGTTGGCAAGGATCTGATAGAGTTGAGTTGGAGGCCAAGAATATGTATGGAGAGACACCCTTGCACATGGCAGCAAAGAATGGGTGCAATGAAGCTACGAAGTTGCTTCTTGCTCATGGTGCTTTTATTGAAGCTAAAGCAAATAATGGTATGACGCCTCTGCATCTTGCTGTTTGGCACTCTCTACGGGCTGAAGAATGCTTAACTGTGCAAACATTGCTTGAGTACAATGCTGATTGCCGTGCTAAGGACAATGAGGGAATGACTCCTATGAATCATCTTTCTCAAGGCCCTGAAAGTAAGAAACTTAGGGACCTTTTACAGCAGCATCTTGAAGAACAGAGAAGAAGACAGGCTATTGAAGCATGCAGTGAAGCCAAAGCTAAAATGGATGAGCTTGAAAATGAAATTGCAAATGTTGTGGGGCTACATGATTTGAAGGTACAACTGCGAAAGTGGGCAAAGGGCATGCTTTTGGATGAGAGACGGAGAGCACTTGGTCTGCAAGTTGGCCCGAGAAGAGCCCCACATATGGCCTTTCTTGGCAATCCTGGAACAGGTAAAACAATGGTAGCTCGGATCCTCTGTAAATTGCTCTATATGGTCGGAATTCTACCAACTGATAAAGTGACTGAGGTACAACGAACTGATTTGGTTGGAGAGTTTGTTGGTCATACTGGTCCAAAGACCAGGAGGAAGATACAAGAAGCAGAAGGGGGAATTCTATTTGTTGATGAAGCTTATAGATTGATACCAATGCAGAAGGCAGATGATAAGGACTATGGATTGGAAGCCTTAGAGGAGATTATGTCTGTCATGGACACTGGAAAAATTGTGGTTATATTTGCTGGATACAGCGAACCAATGAAGAGAGTAATTGCATCAAACGAAGGTTTCTGCAGGCGGGTAACCAAGTTTTTCCATTTTAACGATTTCAGTTCTTCCGAACTAGCTGAAATCCTTCACATCAAGATGAAAAATCAAGCAGTAGAAAGCTTGTTATATGGATTCAAGTTGCATAACTCTTGCAGTGTAGAATCTGTATCAACATTGATAGAAAAGGGAACAACAGAAAAGCAACGCAAGGAAATGAATGGTGGTTTGGTGGACACTATGTTGGTTAATGCTAGAGAAAATTTGGATCTCAGGCTTAGCTTTGATTGTATAGATATAGAAGAACTTCTTACCATCACACTGGTAGATTTAGAAGCTGGGCTTCGGATATTATCACATCATCTCCTGGTTCCTAAATCCCTAAAAATTGGAAGAGATGGGACATTGCGTACGAGCCTGAAGGTGTCAAGAGCTCCAAGATTTGTTTTCTATGATATAGGAAGCAAGAAGAGTGCGCAAGGAACCCAAACAAACGAATAG 1578 0.4278 MYKSQDQRQRSAKPATIHAYAQSGDLVAFQRLLRENPSLLNERNPVMAQTPLHVSAGHNRTDIVKFLLSWQGSDRVELEAKNMYGETPLHMAAKNGCNEATKLLLAHGAFIEAKANNGMTPLHLAVWHSLRAEECLTVQTLLEYNADCRAKDNEGMTPMNHLSQGPESKKLRDLLQQHLEEQRRRQAIEACSEAKAKMDELENEIANVVGLHDLKVQLRKWAKGMLLDERRRALGLQVGPRRAPHMAFLGNPGTGKTMVARILCKLLYMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKIQEAEGGILFVDEAYRLIPMQKADDKDYGLEALEEIMSVMDTGKIVVIFAGYSEPMKRVIASNEGFCRRVTKFFHFNDFSSSELAEILHIKMKNQAVESLLYGFKLHNSCSVESVSTLIEKGTTEKQRKEMNGGLVDTMLVNARENLDLRLSFDCIDIEELLTITLVDLEAGLRILSHHLLVPKSLKIGRDGTLRTSLKVSRAPRFVFYDIGSKKSAQGTQTNE 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2947 525 CDD AAA 241 351 - -
Alju02g2947 525 ProSiteProfiles Ankyrin repeat profile. 84 116 IPR002110 GO:0005515
Alju02g2947 525 SMART ANK_2a 117 150 IPR002110 GO:0005515
Alju02g2947 525 SMART ANK_2a 47 78 IPR002110 GO:0005515
Alju02g2947 525 SMART ANK_2a 84 113 IPR002110 GO:0005515
Alju02g2947 525 ProSiteProfiles Ankyrin repeat region circular profile. 84 109 - -
Alju02g2947 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 401 IPR027417 -
Alju02g2947 525 Gene3D - 3 121 IPR036770 -
Alju02g2947 525 Gene3D - 122 177 IPR036770 -
Alju02g2947 525 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN / ANKYRIN REPEAT FAMILY PROTEIN 3 473 - -
Alju02g2947 525 ProSiteProfiles Ankyrin repeat profile. 117 153 IPR002110 GO:0005515
Alju02g2947 525 SMART AAA_5 242 376 IPR003593 GO:0016887
Alju02g2947 525 Coils Coil 184 211 - -
Alju02g2947 525 PRINTS Ankyrin repeat signature 85 100 IPR002110 GO:0005515
Alju02g2947 525 PRINTS Ankyrin repeat signature 137 151 IPR002110 GO:0005515
Alju02g2947 525 ProSiteProfiles Ankyrin repeat region circular profile. 117 153 - -
Alju02g2947 525 Pfam Ankyrin repeats (3 copies) 82 152 IPR002110 GO:0005515
Alju02g2947 525 FunFam Type VII secretion ATPase EccA 179 378 - -
Alju02g2947 525 Gene3D - 178 378 IPR027417 -
Alju02g2947 525 SUPERFAMILY Ankyrin repeat 17 161 IPR036770 -
Alju02g2947 525 PRINTS CbxX/CfqX superfamily signature 366 385 IPR000641 GO:0005524
Alju02g2947 525 PRINTS CbxX/CfqX superfamily signature 349 366 IPR000641 GO:0005524
Alju02g2947 525 PRINTS CbxX/CfqX superfamily signature 204 218 IPR000641 GO:0005524
Alju02g2947 525 PRINTS CbxX/CfqX superfamily signature 297 316 IPR000641 GO:0005524
Alju02g2947 525 PRINTS CbxX/CfqX superfamily signature 283 297 IPR000641 GO:0005524
Alju02g2947 525 PRINTS CbxX/CfqX superfamily signature 245 260 IPR000641 GO:0005524
Alju02g2947 525 Pfam ATPase family associated with various cellular activities (AAA) 246 361 IPR003959 GO:0005524|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2947 2 110 MAP Kinase Kinase Kinase AT1G14000 32.110 2.47e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g2947 02 45034127 45038083 Alju02g2947 02 45034127 45038083 ECH