Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2943 ATGACGACCACGGTTGCTTGGAGGTTTGGTTCCAATAATGGTAGCAGTCTTGCTGCTAATGATATGGAAAGAAATAGTGAGGGGAACATTCAAGAGTCAGAGCCCCCAACTCCGCATTCTGTTTTGAAGATGGGATTGAGAGACCGCAGCAGCAGCATGGAGGATCCAGATGGGACATTAGCAAGTGTTGCCCAATGCATAGAGCAGCTGCGTCAGAGCTCATCCTCTGCACAAGAGAAGGAGTACTCCTTGAGGCAGTTGTTGGAGCTTATTGATATGCGTGAGAATGCATTTAGTGCTGTTGGATCTCATTCTCAGGCAGTACCAGTGCTTGTTTCTCTTCTCCGATCTGGTTCATTGAGTGTGAAGATTCAGGCAGCGACTGTTCTGGGCTCCCTCTGTAAAGAAAATGAGCTAAGAGTGAAAGTGTTGCTTGGAGGATGCATTCCCCCATTGCTTGGGCTGCTTAAATCCAATTCAGCTGAAGGGCAAGTTGCTGCTGCAAAGACTATTTATGCTGTCTCTCAAGGTGGCTCAAAAGACCATGTTGGATCAAAAATTTTTTCAACTGAAGGAGTAGTACCTGTGCTGTGGGAGCAGCTTCAGAAGGGGCTGAAGACTGGAAATGTAGTTGATGGTTTATTGACGGGAGCCTTGAAAAATCTGTCCAGTAATACTGAGGGATTCTGGAATGCAACAATACATGCCGGAGGAGTTGACATATTAATGAAGTTATTGATAACGGGGCATTCCAGCACTTTAGCTAATGTGTGCTTCTTACTTGCCAGCATGATGGTGGAGGATGCATCCATTTGTTCAAAGGTATTGACTTCAGAGGCAACAAAACAACTCCTGAAATTATTAGGCCCCGGTAATGATGCCCCTATTAGAGCTGAAGCAGCTGGTGCTCTGAAATCTTTGTCTTCTCAGTGCAAAGAAGCAAGGCGCGAGATAGCTAATTCTAATGGCATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCGAAAGAGTTCATGCAGGGCGAGCATGCTCAAGCATTGCAGGAAAATGCTATGTGTGCTCTAGCTAACATCTCTGGTGGTTTGTCTTACGTCATCTCAAGCCTTGGTCAAAGCCTTGAATCATGCACCTCAGCTACTCAAATTGCTGATACATTGGGGGCTTTAGCTTCAGCTCTTATGATATATGATAACAAGGCCGAAGCTACAAGAACATCAGATCCATTGGTGGTTGAGCAAACATTGCTCAAGCAATTCAAACCTCAATCACCTTTTCTTGTGAAGGAACGAACCATTGAAGCCCTAGCTAGTTTGTATGGAAATCCCGTACTGTCAATTAAACTTGCAAATTCAAAAGCAAAGCATTTGCTAGTTGGATTAATCACGATGGCTGTTCATGAAGTGCAAGATGACCTTATAAGAGCTCTCCTGACATTGTGCAATGATGAAGGCAGTCTTTGGTGTGCCCTTCAAGGCCGTGAAGGAGTTCAGCTGCTGATATCCCTTCTGGGGCTTTCATCAGAACAACAGCAAGAATGTGTGGTTGCTCTCCTATGCCTTCTATCTAATGAGAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGTGGGATACCCCCATTAGTTCAAATTTTGGAGACAGGATCCACAAAAGCAAAAGAAGACTCAGCAAAGATCCTTACAAACCTGTGCAATCACAGTGAAGATATACGTGCCTGTGTGGAGAGTGCTAATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCGTAATGGGAAGGAGATAGCAGCGAAAACCTTAAATCACTTGATTCATAAATCTGATACTACCACAATCAGTCAGCTCACAGCATTATTGACAAGTGATCTACCGGAATCTAAGGTCTATGTTTTGGATGCTTTGAGAAGTATGCTGTCAGTTGCCCCTCTTAGTGACATTCAGCGAGAAGGCAGTGCTGCAAGTGATGCCATGGATACGATGATAAAATTAATGAGCTCTAACAAAGAAGAAACTCAGGCTAAGGCAGCATCTGCTCTAGCAGGCATCTTTGAAATGAGGAAAGATGTGCGTGAAAGCAGCGTTGCCGTCAAAGCTCTTTTGTCAGCCATGAAGTTGCTTAATATTGAATCTGAATGCATCCTAATAGAGTCTTCACGCTGCCTTGCAGCAATATTTATTTCCATCAAAGAGAACAGGGATGTAGCTGCTGTTGGTAGAGATGCATTACTCCCCTTAGTTACACTAGCAAATTCTTCTGATTTGGATGTTGCAGAGTTGGCGACATGTGCGGTGGCTAATCTTATTTTAGATAGTGAGATTTCAGAGAAAGCTGTTGCTGAAGAAGTTATCTTGCCGGCTACCAGAGTATTACGTGAAGGCACAATTTCTGGAAAAACTCATGCAGCAGCAGCAATTGCTCGGCTTATACGTTCTCAGCAAGTTGATTATTCTATAACTGAATGTGTGAATCGTGCTGGGACTGTACTTGCTTTGGTTTCCTTCCTGGATTCTGCTATTAATGGATCAGTTTCCACATCTGAGACTATAGATGCACTTGCTGTTCTGTCCAGGTTGGAAAAGAACAGTGCGCAAATTAAACCGGCATGGGCTGTATTGGCTGAATTGCCTGAAAGCATAAATCCAATAGTGCGGTCTATTGCTGATTCAACACCAACATTTCAGGATAAAGTGATCGAGATATTATCCCAGTTATGCAGGGATCAGCCTGTTGTTCTTGGAAACAATGTTGTCGTGGCCTCTGGATGCTTGTGTTCATTGGCTAAAAGGGTAATTGGTACCAAAAATGTGAAGGTCAAAATCGGGGGAGCTGCACTTCTTATTTGTGCCTCCAAAGTGAACCACCAGAGGCTGGTGGAGGAACTCAACCAATCAAACTTGTGTGTTGATCTTGTTCAATCTCTTGTTAATATGCTTTCTTCTGCGCTGCCTTTGTCAAACAAGGGTGAAGAAAACAAGGAATCCATTAGCATTTTGATACACAGAAAAGAAGATGCCAATGGTGGCGTATCCAACACAGGTTCTGCCATTGTATCCAACGCCAACTTAGCTATATGGTTATTGTCTATTCTTGCTTGTCATGATGAGAGGTGTAAAATTACAATAACGGAGGCCGGAGCAATTGACATTCTCATTGAAAAAATCTCAGAGTGTTACTCGCAATATACCCAGGTTGATTATAAAGAAGATAGTAGCATGTGGATTTTTGCATTGTTGTTGGCTGTATTGTTTCAAGATAGAGATATCATCAGAGCACATGCTACCATGAAATCTGTACCAGCTGTTGCCAGTTTATTGAAGTCAGAGGAATTAGCTAACAGATATTTTGCAGCACAATCAGTAGCTAGCCTAGTCTGTAATGGAAGCAGGGGGACACTACTTTCTGTTGCAAATTCAGGGGCTGCAAGTGGGCTAATCTCATTACTCGGCTGCGCCAACATTGATATACAGGACCTTCTGGACTTATCAGAGGAGTTCTCCTTGGTTCGTTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTTAGAGTTGATGACATTAGGGTTGGTGCCACTTCACGGAAGGCAATACCCGCCCTTGTTGATCTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCTTTTTTAGCTCTTGGACTTCTAACTCAGCTCGCAAGAGATTGCCCATCTAATAAGATTGTAATGGTAGAATCTGGGGCCTTGGAGGCACTTACAAAGTATCTTTCACTGGGTCCTCAAGATGCCACTGAAGAAGCTGCTACTGATCTATTGGGAATTCTATTTGACAGTGCTGAGATACGGAGACATGAGGCAGCATTTGGTGCTGTTACTCAACTTGTGGCTGTGTTACGTTTAGGAGGAAGAGGTGCAAGGTACAGTGCTGCCAGGGCATTGGAAAATTTGTTCTCTGCTGATCAGATTAGGAATGCAGAGACTGCTCGACAAGCTGTTCAACCCTTGGTGGAGATTCTTAACACTGGTTTAGAGAAGGAGCAGCATGCTGCAATTGCTACATTGGTTAGGCTTCTAAGTGAAAATCCATCAAGAGTACTAGCTGTTGCTGATGTTGAAATGAATGCAGTGGATGTGCTTTGCAGGATCCTTTTGTCAAATTGTTCATTGGACCTCAAAGGAGATGCCGCTGAATTATGTTGTGTTCTGTTTGGAAATACACGGATTAGATCCTCCATGGCTGCTGCACGCTGTGTTGAACCTCTAGTTTCTCTCCTTGTAAGTGAGTTCAGTCCTGCCCAGCATTCCGTTGTCCGTGCGCTGGATAGGCTTGTTGACGACGAGCAATTGGCTGAACTAGTTGCTGCTCATGGTGCAATTATTCCTCTTGTTGGTCTTCTCTATGGCAGGAATTATATGCTCCATGAGGCCATTTCTAGAGCTCTGGTTAAGCTGGGGAAAGATAGACCTGCTTGTAAAATGGAAATGGTCAAAGCTGGAGTTATTGAAAGCATACTTGACATTCTTCATGAAGCACCTGATTATCTGTGTGCAGCATTTGCAGAATTGCTGCGTATATTGACCAATAATGCTAGCATAGCTAAAGGGCAGTCTGCTTCTAAAGTGGTTGAGCCCCTATTTTTGTTGCTGACGAGACAAGAATTCGGGCCTGACGGACAGCACAGTGCGTTGCAGGTTTTGGTTAATATCTTGGAACATCCACAATGTCGTGCTGACTATACATTGACATCCCACCAAGCTATTGAACCACTTATCCCCCTGCTTGATTCTCCAATACCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTCTCGCATCTGCTTTTGGAGGAACACCTTCAAAAGGATCCAGCTACACAGCAGGTAATTGGTCCTCTTATTCGAGTACTTGGTTCTGGCATCCACATATTGCAACAGAGAGCTGTGAAGGCCCTTGTTAGTATTGCACTGATATGGCCAAATGAAATTGCAAAAGAAGGCGGTGTTGTGGAGCTTTCGAAAGTGATACTGCATGCTGATCCTTCACTTCCTCATGCTTTATGGGAATCTGCTGCTTCTGTTTTGTCAAGTATTCTGCAATTCAGTTCTGAATTCTACTTGGAAGTACCTATTGCCGTGTTGGTAAGATTGCTTCGTGCTGGCTCAGAGAGCTCGGTAATTGGTGCTTTAAATGCTCTTCTAGTGCTGGAAAGTGATGATGGGACTAGTGCAGAAGCAATGGCTGAAAGTGGTGCCATAGAGGCTCTCTTGGAGATTCTAAGATCTCATCAGTGCGAGGAAACTGCTGCTAGACTGCTGGAAGTATTGTTAAACAACGTCAAGATTAGAGAAACAAAAGCTACCAGATCTGCCATTGTACCGTTATCTCAGTACCTCTTGGATCCACAAACCCAAGGCCAGCAAGCAAGGTTACTGGCAACTTTGGCTCTTGGTGATCTATTTCAGAATGAGAGTCTTGCTCAAACAAGTGATGCAGTTTCAGCATGTCGTGCTTTGGTGAATGTGCTTGAAGATCAACCAACAGAAGAAATGAAAGTTGTAGCTATATGTGCTTTGCAGAACCTTGTGATGCATAGCCGATCAAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTACAGATTGTATTGGATCTGATAGGTTCTAGTGATCCAGAAACATCAGTTCAGGCTGCAATGTTCATTAAACTTCTCTTCTCTAATCATACAATTCAAGAATATGCTTCAAGTGAAACAGTCAGAGCAATGACTGCTGCTATAGAGAAGGATTTATGGGCTACTGGAAATGTTAATGATGAGTATCTGAGAGCCTTGAATGCTCTTTTTAGCAACTTCCCACGACTGAGAGCAACTGAACCAGCAACACTCAGCATTCCCCATCTGGTTACATCATTAAAGACGGGCTCTGAAGCCACTCAAGAAGCTGCATTGGATGCACTTTTTCTTCTCAGGCAAGCTTGGTCAGCATGTCCAGCAGAAGTCTCAAGAGCTCAGTCGATAGCAGCCGCAGACGCTATTCCTTTGCTACAGTACTTAATCCAGTCCGGTCCTCCTCGGTTTCAAGAGAAGGCTGAATTTTTATTGCAGTGTTTGCCTGGCACATTAGTTGTGATCATAAAACGTGGTAACAACATGAAGCAGTCAGTTGGAAACCCAAGTGTTTACTGTAAGCTTACACTTGGCAACACTCCTCCAAGGCAAACCACGGTGGTCTCAACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGCCCTCCGAAAGGCCAGAAGCTTAATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAAATTGATCGCGTGGTAATGCTTGGATCTGTCGCCGGAGAATACACCCTACTGCCGCAAAGTAAAAGTGGCCCCTCGAGGAATTTAGAGATAGAATTCCAGTGGTCTAACAAGTGA 6453 0.4406 MTTTVAWRFGSNNGSSLAANDMERNSEGNIQESEPPTPHSVLKMGLRDRSSSMEDPDGTLASVAQCIEQLRQSSSSAQEKEYSLRQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSNSAEGQVAAAKTIYAVSQGGSKDHVGSKIFSTEGVVPVLWEQLQKGLKTGNVVDGLLTGALKNLSSNTEGFWNATIHAGGVDILMKLLITGHSSTLANVCFLLASMMVEDASICSKVLTSEATKQLLKLLGPGNDAPIRAEAAGALKSLSSQCKEARREIANSNGIPALINATIAPSKEFMQGEHAQALQENAMCALANISGGLSYVISSLGQSLESCTSATQIADTLGALASALMIYDNKAEATRTSDPLVVEQTLLKQFKPQSPFLVKERTIEALASLYGNPVLSIKLANSKAKHLLVGLITMAVHEVQDDLIRALLTLCNDEGSLWCALQGREGVQLLISLLGLSSEQQQECVVALLCLLSNENDESKWAITAAGGIPPLVQILETGSTKAKEDSAKILTNLCNHSEDIRACVESANAVPALLWLLKNGSRNGKEIAAKTLNHLIHKSDTTTISQLTALLTSDLPESKVYVLDALRSMLSVAPLSDIQREGSAASDAMDTMIKLMSSNKEETQAKAASALAGIFEMRKDVRESSVAVKALLSAMKLLNIESECILIESSRCLAAIFISIKENRDVAAVGRDALLPLVTLANSSDLDVAELATCAVANLILDSEISEKAVAEEVILPATRVLREGTISGKTHAAAAIARLIRSQQVDYSITECVNRAGTVLALVSFLDSAINGSVSTSETIDALAVLSRLEKNSAQIKPAWAVLAELPESINPIVRSIADSTPTFQDKVIEILSQLCRDQPVVLGNNVVVASGCLCSLAKRVIGTKNVKVKIGGAALLICASKVNHQRLVEELNQSNLCVDLVQSLVNMLSSALPLSNKGEENKESISILIHRKEDANGGVSNTGSAIVSNANLAIWLLSILACHDERCKITITEAGAIDILIEKISECYSQYTQVDYKEDSSMWIFALLLAVLFQDRDIIRAHATMKSVPAVASLLKSEELANRYFAAQSVASLVCNGSRGTLLSVANSGAASGLISLLGCANIDIQDLLDLSEEFSLVRYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGILFDSAEIRRHEAAFGAVTQLVAVLRLGGRGARYSAARALENLFSADQIRNAETARQAVQPLVEILNTGLEKEQHAAIATLVRLLSENPSRVLAVADVEMNAVDVLCRILLSNCSLDLKGDAAELCCVLFGNTRIRSSMAAARCVEPLVSLLVSEFSPAQHSVVRALDRLVDDEQLAELVAAHGAIIPLVGLLYGRNYMLHEAISRALVKLGKDRPACKMEMVKAGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGQSASKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPQCRADYTLTSHQAIEPLIPLLDSPIPAVQQLAAELLSHLLLEEHLQKDPATQQVIGPLIRVLGSGIHILQQRAVKALVSIALIWPNEIAKEGGVVELSKVILHADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRAGSESSVIGALNALLVLESDDGTSAEAMAESGAIEALLEILRSHQCEETAARLLEVLLNNVKIRETKATRSAIVPLSQYLLDPQTQGQQARLLATLALGDLFQNESLAQTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMHSRSNKRAVAEAGGVQIVLDLIGSSDPETSVQAAMFIKLLFSNHTIQEYASSETVRAMTAAIEKDLWATGNVNDEYLRALNALFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTTVVSTGPNPEWDESFSWSFESPPKGQKLNISCKNKSKVGKSSFGKVTIQIDRVVMLGSVAGEYTLLPQSKSGPSRNLEIEFQWSNK 2150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2943 2150 Gene3D - 851 1166 IPR011989 -
Alju02g2943 2150 SUPERFAMILY ARM repeat 973 1378 IPR016024 -
Alju02g2943 2150 SMART C2_3c 2030 2126 IPR000008 -
Alju02g2943 2150 Coils Coil 297 324 - -
Alju02g2943 2150 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1195 1239 IPR000225 GO:0005515
Alju02g2943 2150 Pfam Armadillo/beta-catenin-like repeat 525 564 IPR000225 GO:0005515
Alju02g2943 2150 Pfam Armadillo/beta-catenin-like repeat 104 134 IPR000225 GO:0005515
Alju02g2943 2150 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1379 1613 - -
Alju02g2943 2150 Pfam C2 domain 2029 2119 IPR000008 -
Alju02g2943 2150 Gene3D - 1617 2028 IPR011989 -
Alju02g2943 2150 SUPERFAMILY ARM repeat 65 393 IPR016024 -
Alju02g2943 2150 SUPERFAMILY ARM repeat 1579 2027 IPR016024 -
Alju02g2943 2150 CDD C2 2031 2121 - -
Alju02g2943 2150 Gene3D - 409 643 IPR011989 -
Alju02g2943 2150 Gene3D - 49 408 IPR011989 -
Alju02g2943 2150 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2029 2150 - -
Alju02g2943 2150 Coils Coil 2149 2150 - -
Alju02g2943 2150 Gene3D - 1317 1613 IPR011989 -
Alju02g2943 2150 SUPERFAMILY ARM repeat 1366 1667 IPR016024 -
Alju02g2943 2150 Gene3D - 1176 1316 IPR011989 -
Alju02g2943 2150 Gene3D - 644 842 IPR011989 -
Alju02g2943 2150 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2029 2139 IPR035892 -
Alju02g2943 2150 ProSiteProfiles C2 domain profile. 2010 2127 IPR000008 -
Alju02g2943 2150 MobiDBLite consensus disorder prediction 1 36 - -
Alju02g2943 2150 Gene3D C2 domain 2029 2150 IPR035892 -
Alju02g2943 2150 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 30 2150 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Alju02g2943 2150 SMART arm_5 1438 1478 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 646 686 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 225 266 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 268 309 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 1729 1768 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 1228 1269 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 311 360 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 1310 1351 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 1565 1606 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 817 859 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 567 607 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 1856 1896 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 1397 1437 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 94 135 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 1815 1854 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 1183 1226 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 525 565 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 136 176 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 1480 1520 IPR000225 GO:0005515
Alju02g2943 2150 SMART arm_5 733 771 IPR000225 GO:0005515
Alju02g2943 2150 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 536 578 IPR000225 GO:0005515
Alju02g2943 2150 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1824 1867 IPR000225 GO:0005515
Alju02g2943 2150 MobiDBLite consensus disorder prediction 1 40 - -
Alju02g2943 2150 SUPERFAMILY ARM repeat 508 862 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2943 Alju-ChrAlju02 44973854 44983380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2943 498 620 U-box Gene Family AT2G23140 40.000 3.95e-10 63.2