Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2937 ATGTCAGCGACGCCGTCTCCCGGGGCTGCTCCGGCACCCACGTCGCCACCGGCTCCGGCGACCAACAATACTGCTCCTCCGCCTAGCCGTTCAGCTCCTCCACCGTCCACCCCGGCCTCGCCGCCGCCAGCTACACCCTCTGCTCCACCGCCGGCGACTCCTTCGTCTCCTCCTCCAGCGGCCCCAACTACACCTTCTCCGAGCCCTCCTTCTCTTTCCCCTCCATCAACCTCACCACCACCGGAATCTTCGGCGTCGCCTCCTCCACCGTCCACTCCCAACACTCCGCCGAGTCCGCCAAGTCGCAGCTCGCCGTCTCCTCCTTCGGGCTCAAATTCGCCTTCGACTCCGAATCGAAGTCCGCCACCACCGTCGTCAAAAACGTCGCCGCCGTCTTCGTCATCGTCCTCGTCGAGTGGTATATCAACTGGGGTTGTTGTCGCCATTGCCGTTGGCGCTGTTGCGGTTCTTCTTGTTTTGAGTATTCTCTGCGTTTGCTGTAGGAAGAGAAAGAGAAGACGTGATGAGGAATACTATGGGCCGCCGCCGGTACCGCCTCAGGGACCCAAAGTTGATCCATATGGTGGCCCACAGCGTCAATGGCAACACAATGCTCCCCCTCCTCCTTCGGATCATGTGGTCTCTGTAATGCCAAAGCCATCACCCCCGCCACCACCCCTGGTTGCATCACGGCCCGCCCACCCGCCTGCTTATGCTCAACCTCCACCGCCTCCGCCACCTTTCATAAGCAGCAGTGGTGGGTCTGGTTCTAACTATTCAGGTGGTGATAACATTCTTCCACCTCCCTCTCCAAACTTTGCACTGGGTTTCTCAAAGAGTGCATTTACATATGAGGAGCTGGCCCGGGCAACAGATGGGTTCTCCGATGCTAACCTCCTTGGACAAGGTGGATTTGGGTATGTTCACAGAGGCATTCTTCCGAATGGAAAGGAAGTCGCCGTGAAGCAGCTTAAGGCTGGAAGTGGGCAGGGGGAGCGCGAGTTTCAAGCTGAAGTTGAGATCATTAGTCGGGTTCATCACAAACATCTTGTTTCTTTGGTTGGATACTGCATTACTGGGACACAGAGGTTGCTTGTTTATGAATTTGTTCCCAACAATACATTGGAGTTTCACTTGCATGGAAAAGGTAGGCCTACCATGGACTGGCCCACAAGACTAAAAATTGCTTTAGGATCAGCAAAAGGATTGGCGTATCTTCATGAGGATTGTCATCCTAAGATCATCCACCGCGATATCAAAGCTGCTAACATACTCCTAGATTTTAAGTTTGAAGCAAAGGTGGCAGATTTTGGACTTGCAAAGTTTACATCTGATGTTAATACTCATGTTTCCACTCGAGTGATGGGGACATTTGGTTACCTGGCTCCGGAATATGCTTCTAGTGGGAAACTCTCAGAAAAATCAGATGTTTTCTCCTTTGGAATCATGCTTCTGGAATTAATTACTGGACGCCGACCAGTTGATTCAAGCCATACATTTATGGAGGATAGTTTGGTAGATTGGGCAAGGCCTATGCTCACTCGTGCATTGGAAGATGAGAATTTTGATTCCGTGGTTGATCCAAGACTCCAACATGATTATGACCCCAGTGAGATGGCTCGTATGGTCGCATGTGCTGCAGCTTGCATACGACATTCAGCAAAACGCAGGCCAAAGATGAGCCAGGTTGTTCGCGCTCTAGAAGGAGATGTATCCCTAGCGGACCTTAATGAAGGAATTAAGCCAGGCCATAGCTCTGTCTACAGTTCTCATGAAAGTTCGGATTATGACACAATTCAGTACAATGAGGACATGAAAAAATTCAGGAAAATGGCATTTGGAGGAGGGACCAATGAGTATGGTGCCAGCAACGAATACAGTGGGCCGCCTACAAGCGAGTATGGGTTGTACCCTTCTGGCTCGAGCAGTGAAGGCCAGAGTCGCCAGACCACAAGGGAAATGGAAATGAGAAAGATGAAGAACAGCCAAGGTTTCAGTGGAAGTTCATAA 2010 0.5164 MSATPSPGAAPAPTSPPAPATNNTAPPPSRSAPPPSTPASPPPATPSAPPPATPSSPPPAAPTTPSPSPPSLSPPSTSPPPESSASPPPPSTPNTPPSPPSRSSPSPPSGSNSPSTPNRSPPPPSSKTSPPSSSSSSSSGISTGVVVAIAVGAVAVLLVLSILCVCCRKRKRRRDEEYYGPPPVPPQGPKVDPYGGPQRQWQHNAPPPPSDHVVSVMPKPSPPPPPLVASRPAHPPAYAQPPPPPPPFISSSGGSGSNYSGGDNILPPPSPNFALGFSKSAFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLSEKSDVFSFGIMLLELITGRRPVDSSHTFMEDSLVDWARPMLTRALEDENFDSVVDPRLQHDYDPSEMARMVACAAACIRHSAKRRPKMSQVVRALEGDVSLADLNEGIKPGHSSVYSSHESSDYDTIQYNEDMKKFRKMAFGGGTNEYGASNEYSGPPTSEYGLYPSGSSSEGQSRQTTREMEMRKMKNSQGFSGSS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2937 669 MobiDBLite consensus disorder prediction 622 669 - -
Alju02g2937 669 SUPERFAMILY Protein kinase-like (PK-like) 271 567 IPR011009 -
Alju02g2937 669 Gene3D Transferase(Phosphotransferase) domain 1 370 578 - -
Alju02g2937 669 MobiDBLite consensus disorder prediction 1 141 - -
Alju02g2937 669 Pfam Protein tyrosine and serine/threonine kinase 299 567 IPR001245 GO:0004672|GO:0006468
Alju02g2937 669 MobiDBLite consensus disorder prediction 251 265 - -
Alju02g2937 669 SMART serkin_6 294 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2937 669 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 152 635 IPR047117 -
Alju02g2937 669 Gene3D Phosphorylase Kinase; domain 1 272 369 - -
Alju02g2937 669 MobiDBLite consensus disorder prediction 622 649 - -
Alju02g2937 669 MobiDBLite consensus disorder prediction 211 250 - -
Alju02g2937 669 PRINTS Proline rich extensin signature 26 38 - -
Alju02g2937 669 PRINTS Proline rich extensin signature 38 59 - -
Alju02g2937 669 PRINTS Proline rich extensin signature 63 79 - -
Alju02g2937 669 PRINTS Proline rich extensin signature 5 21 - -
Alju02g2937 669 MobiDBLite consensus disorder prediction 173 267 - -
Alju02g2937 669 MobiDBLite consensus disorder prediction 9 129 - -
Alju02g2937 669 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Alju02g2937 669 ProSiteProfiles Protein kinase domain profile. 294 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2937 669 FunFam Proline-rich receptor-like protein kinase PERK1 370 578 - -
Alju02g2937 669 CDD STKc_IRAK 300 569 - -
Alju02g2937 669 FunFam proline-rich receptor-like protein kinase PERK1 272 369 - -
Alju02g2937 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2937 Alju-ChrAlju02 44864019 44867484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2937 83 652 Trihelix Transcription Factor Family AT1G70460 47.727 1.05e-168 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju02g2937 PK_Tyr_Ser-Thr 4e-47 CL0016