Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2917 ATGGGGGAAGGTGAGGGGGGAGATTTCCCTCCGAAGAATGTGTCATCAGATGCTACAGGAGCAGCAGTGCCGTCGGATGTTCCGGCAAAGAAGCTGGCGAGGCAGCTCGATTTCACTGGCTATAGTGGCGCGGCCTTGCCTGAACAGCCGCAGCCGCAGCCGCAGCCTCAGCCTCAGTTGCAGGGGGTGGCGCAAAGTCAGCTGCAGCCACGCCCTGTTACTACGCAACCGGTTGTTGTGATGCCTATGCCACCGCAGGTTCCTCATTCTTCAGCGAGGGTTGGGAAACCTGAATCTCCAAAATCAAGATCAAGGACCAACTTTGATATGAAGGATGTTACTCCAAAGAAGCAAAAACAGTGTAATTGTAAACACTCAAAATGTCTAAAGTTATATTGCGAATGTTTTGCATCGGGAATATATTGTGATGGGTGCAACTGCGCAAACTGCTATAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCCACTTTGGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCAAGCAGCCCTCATGGAACACGCGATAGCAGGGAGGACGCTGGTGAAATTTTAATACTAGGAAAGCACAACAAGGGGTGCCATTGCAAAAAATCTGGATGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGCTCCGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAAGCTTTGTTCCATGGAGATCAGAATAATAACATTGCATATATCCAGCAGGCAGCAAATGCTGCCATAACTGGAGCAATTGGATCTTCTGGTTATTCATCCCCTCCAGTGTCCAAGAAAAGAAAAGGCCAGGAACTCTTCTTTGGCCCAACAACCAAGGATACATCTGCTGGCAGGCTTGGCCAATTTCAACAGGCAAACCATATCAAAAGTCCTGCACCCTCCTCATCCTTGTCTCCTGTCCCTGGTGCTCGTGTTGGAGCTGCAACATTAGGGCCTTCTAAATTTACATACAGATCCCTTTTGGCAGACATCATTCAACCACAGCACTTGAAGGAGCTTTGCTCCGTCCTGGTGCTAGTATCAGGACAAGCTGCAAAGACTCTTACAGATCAGAAAATGTTGATGGAAAAGAATGCAGAAGATCAGGTGGAAACTTCCGTAGCTTCTTCAACTCAAGAGCAATTGCCAAGTCGAAAGGAAGTTGATATTGAGAAGGCTATGGCTGATGACTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCAGATAATTCTAGTTCAGACGGCGCTGATGCCCCAAAAAGCAGGCCAATGTCTCCTGGAACCTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTCATGACAGCTCCATCTCCTAATGGTTCAATGGATCATGCTTGCAATACGTCTTTGCGTTCTCGTTACGGACAAGGCATGACAGAGGTTTATGCAGAGCAAGAAAGAATTGTTTTGACAAAGTTTAGAGATTTTCTTAATCGGGTTATCACAATGGGAGAATTAAATGAAACAAAGTGTTCTTCATTAACCAGAAGTGAATTAGAGATTCAGAAGGAGGCAATAAACAATGGCAGTGGAAATGCTGGTGCTGCCGAAACGGCGCATCATCAGCAGCTGGGAGCCACCAGTAATGGAGTTGTCAATGCTGTTGTGCCCCCCATGGCCTCTAGTATGAACATGATTGCTTCAGAGGCTCTTGGTAATCTTGTCCCTGAAAATGGGGAAAGTAAGCCTAAGATTGAAAAGGAGATGTGA 1794 0.4599 MGEGEGGDFPPKNVSSDATGAAVPSDVPAKKLARQLDFTGYSGAALPEQPQPQPQPQPQLQGVAQSQLQPRPVTTQPVVVMPMPPQVPHSSARVGKPESPKSRSRTNFDMKDVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCANCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNIAYIQQAANAAITGAIGSSGYSSPPVSKKRKGQELFFGPTTKDTSAGRLGQFQQANHIKSPAPSSSLSPVPGARVGAATLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKMLMEKNAEDQVETSVASSTQEQLPSRKEVDIEKAMADDCSSANQTDKISPDNSSSDGADAPKSRPMSPGTLALMCDEQDTMFMTAPSPNGSMDHACNTSLRSRYGQGMTEVYAEQERIVLTKFRDFLNRVITMGELNETKCSSLTRSELEIQKEAINNGSGNAGAAETAHHQQLGATSNGVVNAVVPPMASSMNMIASEALGNLVPENGESKPKIEKEM 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2917 597 ProSiteProfiles CRC domain profile. 117 241 IPR005172 -
Alju02g2917 597 Coils Coil 151 171 - -
Alju02g2917 597 SMART CXC_2 116 156 IPR033467 -
Alju02g2917 597 SMART CXC_2 201 242 IPR033467 -
Alju02g2917 597 MobiDBLite consensus disorder prediction 416 438 - -
Alju02g2917 597 PANTHER TESMIN/TSO1-RELATED 46 513 IPR028307 -
Alju02g2917 597 MobiDBLite consensus disorder prediction 385 448 - -
Alju02g2917 597 MobiDBLite consensus disorder prediction 58 74 - -
Alju02g2917 597 MobiDBLite consensus disorder prediction 388 402 - -
Alju02g2917 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 204 238 IPR005172 -
Alju02g2917 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 118 153 IPR005172 -
Alju02g2917 597 MobiDBLite consensus disorder prediction 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2917 Alju-ChrAlju02 44403898 44413347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2917 1 534 CPP Transcription Factor Family AT4G29000 57.168 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Alju02g2917 TCR 3.2e-12 No_clan