Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2907 ATGTCTGTGCCAGAGAAAGACTATGTAAGCTTATCAGAGACTCCAACTCCACCAATGGAAAGCTCAGACAAGTTTTCTCAGAGAAGAAACGGCTTGAATCTTAAGGCTACTGAACTAAGGCTCGGGTTACCCGGGTCGGAGTCCCCCGAGAGGGATTTGGATTCGGAGGAAAAGAACGAGTATCCATTAGGCATACTGAAGAGTCTCGTGTCTGGGGCCAAGAGGGGCTTCTCAGACGCCATTGTTGGCGGTTCTGGGAAGTGGGTTCTCTCCGGCAAAGGTGGTTCTGATATGGGTTTGGGTAAAGATTGTGGCTTGTTCTCTCCCAGAGGAGCTAACTCCGGCAAGACCCCTGTCGGGTCGGATTCCGGCAATCATCAAGCCGGTTTGGGTCCCCCTGTTGTGAAAGATAGTATTCCTCAGCCAACAAAGCCTTTGCATGAGAAGAAGCCTCAGTTTCCTGCTCCTGCTTCAAAGGCACAAGTTGTGGGATGGCCACCAATCCGATCTTTTCGGAAGAACTCGATGGCATCTCAGCCTCAAAAGAATGGAGAAGATGCAGAATCAGGAAAGAGTGGTGGGTGTCTTTATGTAAAAGTGAGCATGGATGGTGCTCCATACTTGAGGAAGGTTGATCTCAACAACTTTGCCTCTTACAAGGAACTTTCTTCTGCACTGGAAAATATGTTCAGTGGCTTTACAATGAGTCAATGCGGCTCTCATGGGGTTTCTGGTCGGGACAATATGAGTGAGAGTAGATTGATGGATCTGCTTAATGGTTCGGAATACGTGCTTACGTACGAGGATAAGGATGGCGATTGGATGCTAGTTGGTGATGTTCCTTGGGAGATGTTCACTGATTCTTGCAAGAGGATGAGGATAATGAAGAGTTCTGAAGCAATTGGTTTAGCACCGAGAGCGATGGAGAAGTGCAGAAGTCGGAACTAG 948 0.4821 MSVPEKDYVSLSETPTPPMESSDKFSQRRNGLNLKATELRLGLPGSESPERDLDSEEKNEYPLGILKSLVSGAKRGFSDAIVGGSGKWVLSGKGGSDMGLGKDCGLFSPRGANSGKTPVGSDSGNHQAGLGPPVVKDSIPQPTKPLHEKKPQFPAPASKAQVVGWPPIRSFRKNSMASQPQKNGEDAESGKSGGCLYVKVSMDGAPYLRKVDLNNFASYKELSSALENMFSGFTMSQCGSHGVSGRDNMSESRLMDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRMRIMKSSEAIGLAPRAMEKCRSRN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2907 315 FunFam Auxin-responsive protein 190 307 - -
Alju02g2907 315 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 32 302 IPR003311 GO:0005634|GO:0006355
Alju02g2907 315 MobiDBLite consensus disorder prediction 45 59 - -
Alju02g2907 315 MobiDBLite consensus disorder prediction 1 59 - -
Alju02g2907 315 MobiDBLite consensus disorder prediction 109 160 - -
Alju02g2907 315 ProSiteProfiles PB1 domain profile. 195 297 IPR000270 GO:0005515
Alju02g2907 315 Pfam AUX/IAA family 37 306 IPR033389 -
Alju02g2907 315 Gene3D - 190 308 - -
Alju02g2907 315 MobiDBLite consensus disorder prediction 14 33 - -
Alju02g2907 315 SUPERFAMILY CAD & PB1 domains 190 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2907 Alju-ChrAlju02 44140485 44143239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2907 198 305 B3 DNA Binding Superfamily AT4G23980 30.556 1.24e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju02g2907 AUX_IAA 3.9e-88 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g2907 02 44140485 44143239 Alju02g2907 02 44140485 44143239 ECH