Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2873 ATGAGAAATCCAACTCCCTTGTTCTTCTTCTTCTTCCTTCTCTTCCTGAGCTGTGTGAATTCTCAGTCTGAACTTTATGCTCAAGAACATGAAGTTTTGCTGAGGATGAAACAGTACTTTAACAACCCATCTTCTCTCATTCACTGGACAAATTCATCATCTCATTGTTCATGGTCTGAGATAAAGTGCACCAATAACTCTGTTACAGGGCTGGCTCTGATCAACATCAGTATAAGCCAACCGATACCAACTTTCATCTGTGAGCTTAAGAATCTCAGTTCTATTGATTTTCAATCGAATTTCATTCCTCTGGAGTTCCCAACGTATCTCTACAATTGCCCCAAGCTGGAGTACTTGGACCTCTCTAATAATTACTTTGTTGGTAAGGTTCCAGATGACATTGACCGATTGGAAGGCCTGCGGTTTCTTAACCTCGGCGGTAACAACTTCTCCGGCGAGATTCCGGTGAGTGTCACCAAGTTAAAAGAGCTCACAAGTCTTCGGCTTGATAGCTGTCTCTTCAATGGCACTATCCCAAGTGAAATAGGCAACTTATCCAATCTTGAATTCTTAAATTTGGGCTTCAACCTATTCTCACCTTCACAGTTTCCCTCTAGCTTCATGAAGCTCACGAAATTGAAGGATTTTGAGATGTCTTCCTGCAACTTGACCGGTGAAATCCCTGAAAGCATCGGGCAGCTAACGGACTTAGAGACATTGGATTTGTCCATGAATCAGTTAAGTGGCAACATTCCTAGTAGTTTATTTATGCTGAAGAATCTGAGCATTATGTTTCTTTGGAAGAATCAGCTTAATGGTGAGCTACCTCAAATGATTGAAGCTTTAAACTTGACCATCGTTGATCTTACTCGGAACAAGCTTACAGGGAAGATACCAAATGGCTTTGGGAATCTCCAGAAGCTAACTGGTTTGAACTTTGGTCTTAACCAATTATCAGGTGAGATTCCTGAAAGCTTAGGCCGTCTTCAATCTATAATAGACTTTAGTATCTTCTTCAACAATTTATCAGGCAATATTCCTCCAGAGTTTGGGCTCCATTCAAACCTTACAAGATTTGAGATTGCTTCAAACAATTTCACTGGTAGTCTTCCTCAGAACTTATGTTACCATGGCAATTTGTTTAGATTAACAGCTTATGACAATAAACTCAGTGGAGAATTACCAGAATCACTCGGAAACTGTAGCAGCTTGCAAGAGTTGAAAGTCTACAATAATGAGCTCTCTGGTGAAATTCCAAGCAGCCTTTGGGCTTCTCAGAATTTGTCAATTTTTATGATCAATGACAACAAGTTCACAGGTGAGCTTCCAGAAATATTGCCTGTGAATGTTTCACTCATGACAATTGGTTACAATCAGTTTTCTGGTAGAATCCCAGCAGGAATATCTTCCATGAAGAATCTGGTTGTGTTTAATGCAAGTAGAAACCTCTTTAATGGAAGTATCCCACAAGAGCTAACCAGTCTTTCTCAGCTCGCAACTTTGTTGCTTGATCAGAACAAACTTTCTGGGCCACTTCCATCCAAGATTATATCATGGGAATCTCTGAGAACTCTAAACTTGAGCCAAAATCAACTCTCCGGCGAAATCCCAGATTCGATTGGTCATTTGCTTGACCTTGCTCAACTAGATTTGTCAGAAAATCAACTCTCTGGCCAAATTCCATCTCAACTAGGCCTTTTGAGACCCTCTGTCCTCAACCTTTCCTCTAATCATTTGACTGGGAAGATTCCCAGTGAATTTGATAATCTTGCTTACGCCACCAGCTTCTTGAACAATTCTGGTCTTTGTACTGATACAGATGGATTAAACCTTAAGTTGTGCAATTCTGGTTCAGTCCCTCAAAGTTCAAGCAAAGGCTCATCTGTTTCTGTTGGGTTGATCATAGGCCTTGTTGTAGCCGCCTGCATAGCAATTTTCTTGTTATCACTTTTGATGATGAAATTCTACCAAAGGAGAGATCAAGAACTGGAAACTTCATGGAAGTTAACTTCCTTCCAAAAGCTCAGTTTCACAGAATCAAACATCGTCTCATCCATGACGGATTATAACATCATCGGCAGTGGAGGGTATGGTACGGTGTACCGAATCGCCATCAACGATGATGTCGGCTATGTTGCTGTGAAGAAGATAAGCAACAATAGGAAGTTGGATCAGAAACTTGAGGATGCATTTATTGCGGAAGTTAAAATCTTGGGCACAATTCGTCACATTAACATAGTGAAGTTGCTATGTTGTATGTCTAATGAGGATTCTCTGCTTCTCGTTTATGAGTATATGGAAAATCACAGTCTTGATAAGTGGCTACACAGGAAGATTAATAATGGCTCTTCAGGTGGGTTATCATCTTCTACACTTCATAGTGTTTTTCTTGATTGGGCAAAGAGAATGCAAATAGCCATTGGGATTGCACAAGGTTTGAGCTACATGCATCATGACAGCTCCCCGCCGATTATTCATCGCGATGTCAAAGCAAGCAATATTCTTTTAGATTCTCAGTTCAAAGCAAAAGTTGCAGATTTTGGTCTTGCGAGGATGTTGATCAAATCAGGAAAACAAGAAACCATGTCAGCAGTTGTTGGCTCTTTTGGTTACATCGCTCCAGAATATGCTCAAACGAAAAGAGTTAACGAAAAGGTTGATGTTTATGGCTTTGGGGTGATCCTGCTAGAGCTGACAACAGGAAAAGAAGCTAACTATGGAGATGAACACTCGTCTCTCGCAGAATGGGCATGGCGTGAGATTCGATCAGGAAGCAACATAGAACAAATTCTAGACGAAGATGTCAAGGACACCGTTTACTTGTCAGAAATGTGCAGTGTCTTCAAGCTTGGGGTGATCTGTACAAGCAAAGAGCCAACTAGTAGACCTTCCATGAAAGAAGCTCTGAATATATTGCTGCGCTTGAGAGGACTAGTTGGTTATGTAGAAATGAATTCTGGTCATGTTGAGGTTGTTCCTCTACTAAAGAATTCTAAAAGGGAGAGTAGGTTAGATATTGATGATAATGATATATAG 3036 0.4058 MRNPTPLFFFFFLLFLSCVNSQSELYAQEHEVLLRMKQYFNNPSSLIHWTNSSSHCSWSEIKCTNNSVTGLALINISISQPIPTFICELKNLSSIDFQSNFIPLEFPTYLYNCPKLEYLDLSNNYFVGKVPDDIDRLEGLRFLNLGGNNFSGEIPVSVTKLKELTSLRLDSCLFNGTIPSEIGNLSNLEFLNLGFNLFSPSQFPSSFMKLTKLKDFEMSSCNLTGEIPESIGQLTDLETLDLSMNQLSGNIPSSLFMLKNLSIMFLWKNQLNGELPQMIEALNLTIVDLTRNKLTGKIPNGFGNLQKLTGLNFGLNQLSGEIPESLGRLQSIIDFSIFFNNLSGNIPPEFGLHSNLTRFEIASNNFTGSLPQNLCYHGNLFRLTAYDNKLSGELPESLGNCSSLQELKVYNNELSGEIPSSLWASQNLSIFMINDNKFTGELPEILPVNVSLMTIGYNQFSGRIPAGISSMKNLVVFNASRNLFNGSIPQELTSLSQLATLLLDQNKLSGPLPSKIISWESLRTLNLSQNQLSGEIPDSIGHLLDLAQLDLSENQLSGQIPSQLGLLRPSVLNLSSNHLTGKIPSEFDNLAYATSFLNNSGLCTDTDGLNLKLCNSGSVPQSSSKGSSVSVGLIIGLVVAACIAIFLLSLLMMKFYQRRDQELETSWKLTSFQKLSFTESNIVSSMTDYNIIGSGGYGTVYRIAINDDVGYVAVKKISNNRKLDQKLEDAFIAEVKILGTIRHINIVKLLCCMSNEDSLLLVYEYMENHSLDKWLHRKINNGSSGGLSSSTLHSVFLDWAKRMQIAIGIAQGLSYMHHDSSPPIIHRDVKASNILLDSQFKAKVADFGLARMLIKSGKQETMSAVVGSFGYIAPEYAQTKRVNEKVDVYGFGVILLELTTGKEANYGDEHSSLAEWAWREIRSGSNIEQILDEDVKDTVYLSEMCSVFKLGVICTSKEPTSRPSMKEALNILLRLRGLVGYVEMNSGHVEVVPLLKNSKRESRLDIDDNDI 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2873 1011 FunFam Kinase family with leucine-rich repeat domain-containing protein 766 983 - -
Alju02g2873 1011 Gene3D Ribonuclease Inhibitor 202 338 IPR032675 -
Alju02g2873 1011 Gene3D Ribonuclease Inhibitor 26 201 IPR032675 -
Alju02g2873 1011 SUPERFAMILY Protein kinase-like (PK-like) 676 972 IPR011009 -
Alju02g2873 1011 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Alju02g2873 1011 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 182 275 - -
Alju02g2873 1011 ProSiteProfiles Protein kinase domain profile. 686 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2873 1011 ProSiteProfiles Leucine-rich repeat profile. 521 543 IPR001611 GO:0005515
Alju02g2873 1011 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 9 967 - -
Alju02g2873 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Alju02g2873 1011 SMART serkin_6 686 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2873 1011 SUPERFAMILY L domain-like 450 595 - -
Alju02g2873 1011 ProSitePatterns Protein kinases ATP-binding region signature. 692 716 IPR017441 GO:0005524
Alju02g2873 1011 Pfam Leucine Rich Repeat 571 590 IPR001611 GO:0005515
Alju02g2873 1011 Pfam Leucine Rich Repeat 521 543 IPR001611 GO:0005515
Alju02g2873 1011 Pfam Leucine Rich Repeat 283 305 IPR001611 GO:0005515
Alju02g2873 1011 Gene3D Transferase(Phosphotransferase) domain 1 766 980 - -
Alju02g2873 1011 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Alju02g2873 1011 FunFam Receptor-like protein kinase HSL1 666 765 - -
Alju02g2873 1011 Gene3D Ribonuclease Inhibitor 339 616 IPR032675 -
Alju02g2873 1011 SUPERFAMILY RNI-like 131 453 - -
Alju02g2873 1011 FunFam Leucine-rich repeat receptor-like protein kinase TDR 302 616 - -
Alju02g2873 1011 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Alju02g2873 1011 Pfam Protein kinase domain 688 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2873 1011 ProSiteProfiles Leucine-rich repeat profile. 236 258 IPR001611 GO:0005515
Alju02g2873 1011 Gene3D Phosphorylase Kinase; domain 1 662 765 - -
Alju02g2873 1011 FunFam Receptor-like protein kinase HSL1 isoform A 26 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2873 Alju-ChrAlju02 42966430 42970085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2873 29 1011 Receptor kinase-like Gene Family AT5G25930 49.345 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju02g2873 Pkinase 1.7e-51 CL0016