Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2872 ATGAGAAATCCAACTCCATTGTTCTTCTTCTTCTTCTTCCTTCTCTTCCTAGGCTGTGTGAATTCTCAGTCTGAACTTTATGCTCAAGAGCATGAAGTTTTGCTGAGGATGAAACAGTACTTTAACAACCCATCTTCTCTCATTCACTGGACAAATTCATCATCTCATTGTTCATGGTCTGAGATAACGTGCACCAATAACTCTGTTACAGGGCTGGCTCTGATCAACATCAGTATAAGCCAACCGATACCAACTTTCATCTGTGAGCTTAAGAATCTCAGTTCTATTGATTTTCAATGGAATTCCATTCCTCTGGAGTTCCCAACGTATCTCTACAATTGCCGCAAGCTGGAGTACTTGGACCTCTCTAATAATTACTTTGTTGGTAAGGTTCCAGATGACATTGACCGATTGGAAGGCCTGCGGTTTCTTAACCTCGGCGGTAACAACTTCTCCGGCGAGATTCCGGTGAGTGTCACCAAGTTAAAAGAGCTCACAAGTCTTCAGCTTGATAAATGTCTCTTCAATGGCACTATCCCAAGTGAAATAGGCAACTTATCCAATCTTGAAGTCTTAAATTTGGGCTTCAACCTATTCTCACCTTCACAGTTTCCCTCTAGCTTCATGAAGCTCACGAAATTGAAGGATTTTGAGATGTCTTCCTGCAACTTGACCGGTGAAATCCCTGAAAGCATCGGGCAGCTAACGGACTTAGAGACATTGGATTTGTCCATGAATCAGTTAAGTGGCAACATTCCTAGTAGTTTATTTATGCTGAAGAATCTGAGCATTATGTTTCTTTGGAAGAATCAGCTTAATGGTGAGCTACCTCAAATGATTGAAGCTTTAAACTTGACCATCGTTGATCTTACTCGGAACAAGCTTACAGGGAAGATACCAAATGGCTTTGGGAATCTCCAGAAGCTAACTGGTTTGAACTTTGGTCTTAACCAATTATCAGGTGAGATTCCTGAAAGCTTAGGCCGTCTTCAATCTATAATAGACTTTAGTATCTTCTTCAACAATTTATCAGGCAATATTCCTCCAGAGTTTGGGCTCCATTCAAATCTTACAAGATTTGAGATTGCTTCAAACAATTTCACTGGTAGTCTTCCTCAGAACTTATGTTACCATGGCAATTTGTTTAGATTAACAGCTTATGACAATAAACTCAGTGGAGAATTACCAGAATCACTCGGAAACTGTAGCAGCTTGCAAGAGTTGAAAGTCTACAATAATGAGCTCTCTGGTGAAATTCCAAGCAGCCTTTGGGCTTCTCAGAATTTGTCAATTTTTATGATCAATGACAACAAGTTCACAGGTGAGCTTCCAGAAATATTGCCTGTGAATGTTTCACTCATGACAATTGGTTACAATCAGTTTTCTGGTAGAATCCCAGCAGGAATATCTTCCATGAAGAATCTGGTTGTGTTTAATGCAAGTAGAAACCTCTTTAATGGAAGTATCCCACAAGAGCTAACCAGTCTTTCTCAGCTCGCAACTTTGTTGCTTGATCAGAACAAACTTTCTGGGCCACTTCCATCCAAGATTATATCATGGGAATCTCTGAGAACTCTAAACTTGAGCCAAAATCTACTCTCCGGCGAAATCCCAGATTCGATTGGTCATTTGCTTGACCTTGCTCAACTAGATTTGTCAGAAAATCAACTCTCTGGCCAAATTCCATCTCAACTTGGCCTTTTGAGACCCTCTGTCCTCAACCTTTCCTCTAATCATTTGACTGGGAAGATTCCCAGTGAATTTGATAATCTTGCTTACGCCACCAGCTTCTTGAACAATTCTGGTCTTTGTACTGATACAGATGGATTAAACCTTAAGTTGTGCAATTCTGGTTCAGTCCCTCAAAGTTCAAGCAAAGGCTCATCTGTTTCTGTTGGGTTGATCATAGGCCTTGTTGTAGCCGCCTGCATAGCAATTTTCTTGTTATCACTTTTGATGATGAAATTCTACCAAAGGAGAGATCAAGAACTGGAAACTTCATGGAAGTTAACTTCCTTCCAAAAGCTCAGTTTCACAGAATCAAACATCGTCTCATCCATGACGGATTATAACATCATCGGCAGTGGAGGGTATGGTACGGTGTACCGAATCGCCATCAACGATGATGTCGGCTATGTTGCTGTGAAGAAGATAAGCAACAATAGGAAGTTGGATCAGAAACTTGAGGATGCATTTATTGCGGAAGTTAAAATCTTGGGCACAATTCGTCACATTAACATAGTGAAGTTGCTATGTTGTATGTCTAATGAGGATTCTCTGCTTCTTGTTTATGAGTATATGGAAAATCACAGTCTTGATAAGTGGCTACACAGGAAGATTAGTAATGGCTCTTCTGGTGGGTTATCATCTTCTACACTTCATAGTGTTTTTCTTGATTGGCCAAAGAGAATGCAAATAGCCATTGGGATTGCACAAGGTTTGAGCTACATGCATCATGACAACTCACCACCGATTATTCATCGCGATGTTAAAGCAAGCAATATTCTTTTGGATTTTCAGTTCAAAGCAAAAGTTGCAGATTTTGGTCTTGCGAGGATGTTGATCAAACCAGAGGAACAAGATACCATGTCAGCTGTTGTTGGCTCTTTTGGTTACATTGCTCCAGAATATGCTCAAACAAAAAGAGTAAACGAAAAGGTTGATGTTTATAGCTTTGGGGTGATCCTGCTGGAGCTGACAACAGGAAAAGAAGCTAATTATGGAGATGAACACTCGTCTCTCGCAGAATGGGCATGGCGTGAGATTCGATCAGGAAGCAACATAGAACAAGTTCTAGACGAAGATGTTAAGGACACCTTGTACTTGTTGGAAATGTGCAGTGTCTTCCAGCTTGGGGTGATGTGTACAAGCAAAGAGCCAGCTAGTAGACCTTCCATGAAAGAGGCTATGAATATATTGATGCGCTTGAGAGAATCAGTTGGTTATGTAGATATGAATTTTGGTCATTTTGAGGGTGTTCCTCTGCTAAAGAATTCTAAAAGGGAGAGTAGGTTAGATATTGATGATAATGATAGCTAA 3039 0.4041 MRNPTPLFFFFFFLLFLGCVNSQSELYAQEHEVLLRMKQYFNNPSSLIHWTNSSSHCSWSEITCTNNSVTGLALINISISQPIPTFICELKNLSSIDFQWNSIPLEFPTYLYNCRKLEYLDLSNNYFVGKVPDDIDRLEGLRFLNLGGNNFSGEIPVSVTKLKELTSLQLDKCLFNGTIPSEIGNLSNLEVLNLGFNLFSPSQFPSSFMKLTKLKDFEMSSCNLTGEIPESIGQLTDLETLDLSMNQLSGNIPSSLFMLKNLSIMFLWKNQLNGELPQMIEALNLTIVDLTRNKLTGKIPNGFGNLQKLTGLNFGLNQLSGEIPESLGRLQSIIDFSIFFNNLSGNIPPEFGLHSNLTRFEIASNNFTGSLPQNLCYHGNLFRLTAYDNKLSGELPESLGNCSSLQELKVYNNELSGEIPSSLWASQNLSIFMINDNKFTGELPEILPVNVSLMTIGYNQFSGRIPAGISSMKNLVVFNASRNLFNGSIPQELTSLSQLATLLLDQNKLSGPLPSKIISWESLRTLNLSQNLLSGEIPDSIGHLLDLAQLDLSENQLSGQIPSQLGLLRPSVLNLSSNHLTGKIPSEFDNLAYATSFLNNSGLCTDTDGLNLKLCNSGSVPQSSSKGSSVSVGLIIGLVVAACIAIFLLSLLMMKFYQRRDQELETSWKLTSFQKLSFTESNIVSSMTDYNIIGSGGYGTVYRIAINDDVGYVAVKKISNNRKLDQKLEDAFIAEVKILGTIRHINIVKLLCCMSNEDSLLLVYEYMENHSLDKWLHRKISNGSSGGLSSSTLHSVFLDWPKRMQIAIGIAQGLSYMHHDNSPPIIHRDVKASNILLDFQFKAKVADFGLARMLIKPEEQDTMSAVVGSFGYIAPEYAQTKRVNEKVDVYSFGVILLELTTGKEANYGDEHSSLAEWAWREIRSGSNIEQVLDEDVKDTLYLLEMCSVFQLGVMCTSKEPASRPSMKEAMNILMRLRESVGYVDMNFGHFEGVPLLKNSKRESRLDIDDNDS 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2872 1012 SUPERFAMILY Protein kinase-like (PK-like) 677 973 IPR011009 -
Alju02g2872 1012 Pfam Leucine rich repeat 108 151 IPR001611 GO:0005515
Alju02g2872 1012 Pfam Leucine Rich Repeat 284 306 IPR001611 GO:0005515
Alju02g2872 1012 Pfam Leucine Rich Repeat 522 544 IPR001611 GO:0005515
Alju02g2872 1012 Pfam Leucine Rich Repeat 572 591 IPR001611 GO:0005515
Alju02g2872 1012 Gene3D Transferase(Phosphotransferase) domain 1 767 986 - -
Alju02g2872 1012 Gene3D Ribonuclease Inhibitor 352 620 IPR032675 -
Alju02g2872 1012 ProSiteProfiles Leucine-rich repeat profile. 237 259 IPR001611 GO:0005515
Alju02g2872 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Alju02g2872 1012 FunFam Leucine-rich repeat receptor-like protein kinase TDR 303 617 - -
Alju02g2872 1012 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 27 183 - -
Alju02g2872 1012 PANTHER UNNAMED PRODUCT 203 905 - -
Alju02g2872 1012 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Alju02g2872 1012 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 184 276 - -
Alju02g2872 1012 SUPERFAMILY RNI-like 133 516 - -
Alju02g2872 1012 FunFam Kinase family with leucine-rich repeat domain-containing protein 767 986 - -
Alju02g2872 1012 ProSiteProfiles Leucine-rich repeat profile. 522 544 IPR001611 GO:0005515
Alju02g2872 1012 FunFam Receptor-like protein kinase HSL1 667 766 - -
Alju02g2872 1012 Gene3D Ribonuclease Inhibitor 27 202 IPR032675 -
Alju02g2872 1012 SMART serkin_6 687 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2872 1012 SUPERFAMILY L domain-like 67 156 - -
Alju02g2872 1012 ProSitePatterns Protein kinases ATP-binding region signature. 693 717 IPR017441 GO:0005524
Alju02g2872 1012 Gene3D Ribonuclease Inhibitor 203 351 IPR032675 -
Alju02g2872 1012 Pfam Protein kinase domain 689 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2872 1012 SMART LRR_typ_2 186 210 IPR003591 -
Alju02g2872 1012 SMART LRR_typ_2 496 520 IPR003591 -
Alju02g2872 1012 SMART LRR_typ_2 544 568 IPR003591 -
Alju02g2872 1012 SMART LRR_typ_2 235 259 IPR003591 -
Alju02g2872 1012 SMART LRR_typ_2 138 162 IPR003591 -
Alju02g2872 1012 SMART LRR_typ_2 306 330 IPR003591 -
Alju02g2872 1012 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Alju02g2872 1012 ProSiteProfiles Protein kinase domain profile. 687 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2872 1012 SUPERFAMILY L domain-like 515 585 - -
Alju02g2872 1012 Gene3D Phosphorylase Kinase; domain 1 663 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2872 Alju-ChrAlju02 42959149 42962998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2872 30 975 Receptor kinase-like Gene Family AT5G25930 50.418 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju02g2872 Pkinase 1.6e-50 CL0016