Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2871 ATGCCATATTATTTATACTCCATCTTCTTCTTCTTCTTCTTCTTATTCTTTGTACTGAGTGATGCTGAGACTAATAAGTATCCTCTGTATGATCGAGAACATGCAGTCCTACTTAACATAAAACAACACCTTCATCCATTCCTCAATCGGTGGACCCCACCGAACTCCTCACATTGTTCTTGGCCTTGGATCAACTGTACCGATGGCTCTGTCACAAAACTAGATTTTGGTGACAAGAACATCACTAAAACGATACCTCCTCTCGTGTGTGACCTCAAAAATCTCACCTTTATTGATTTCCAGTTTAATTATTTTTCTGGGGAGTTCCCAAAATTTCTCTACGACTGCCCCAAGCTTGAGTACCTTGACCTCTCCCAGAACAGCTTTGCGGGTCCGATTCCAAATGATATTGACCGACTGGCCAACCTGCGTTTCCTTAATCTTGCCGCCAACTATTTCTCCGGCGACATTCCGGCGAGCATAGGAAGGTTGAAGGAGCTGAGAAATCTCCAACTTTACTTCTGTAGATTGAACGGTAGTATCCCAGATGAAATAGGCGACTTGTCCAATCTTGAATTTTTAGACCTGAGCCTAAACACCAATCTTCCTCCTACACAGTTGCCGGCGAGCTTCACCAAGTTGAAAAAAGTGAAGACCTTCAGTATGAGATCCATGAATTTGATTGGGAAAATTCCAGAAAGTATTGGGGAAATGGTGAGTTTGGAGGAATTGGATTTATCGAAGAATGGCTTAAATGGGCAAATCCCCAGTAGTTTGTTTGCTCTGAAGAATCTAAGCATATTGTATCTTTGGAACAATAGGCTATCTGGGGAAATACCTACAGAAATTGAAGCTCTGAATCTGACTGTACTGGATGTTTCAGAGAATTTTCTTACTGGAAAAATCCCAGATGGTTTAGGGAAGCTCAAAAAGCTAACAGTTTTGGGTCTGCATATGAATCAACTATCAGGAGAGATACCAGAAAGCCTTGCTCATCTGCCAGCTCTAGTGGAATTCAAGGTTTTTGAAAACAGTCTATCAGGTACTCTGCCTCCTTACTTTGGTCGTTATTCGCCACTCGAAACCTTTGAGGTTGCGACCAATAGATTGACAGGAAAATTGCCAGAGGATTTATGTTACAATGGCAAGTTAGTTGGAGTAAGTGCTTATGACAACGATCTAAGTGGGGAGCTGTCAGAATCATTAGGAAGCTGCAACAATAGCCTGCAATACTTGTATCTTCAAAATAATAGTTTTTCAGGCAAAATCCCTGCAGGCCTTTGGACGTCATATAATTTGGTGACTTTAATGATCAACAGCAACAAGTTCACCGGCGAGCTACCTAAAAGTTTAGCTTGGAATCTTTCAAGTTTGATCATAAGCAACAATCAATTCTCTGGTAGAATACCAGTAGGAGTATCTACCTGGAAGAATCTGGTCAAGTTTGAAGCTAGTAAGAATCTCTTCAATGGGAGTATTCCACCAGAGCTAACCACTCTTCCTAAGCTAACAAATTTGTTGCTTGATCAAAACCAGCTAACAGGTCCACTTCCATCAGAAATCATATCTTGGAAATTTCTCAGTGCTCTAAATTTGGGCCACAATCAACTCTCTGGACCAATCCCAGATTCTATTGATCGTTTACCCAACCTATCACAACTAGACCTGTCAAATAATCAGCTCTCCGGTAGTGTTCCACCTCAACTTGGTAAATTGTCAATGACCCTCACAAACCTCAATCTCTCCTCCAATCTTTTCACAGGGAAGATTCCTAGTGAATTTGAAAATCCTTTCTATTCTGATAGCTTTCTAAACAATTCTGGCCTCTGTGCTGATACCAAAAAGCTAAACCTTCCCTTGTGCGATTCCGGTTCTGGCCTGCAAATTGAAAGGTTGAGAAAGAAATCATCTGCATCTCTTGCTTTGATCATATGCCTAGTGACTGTGGCCTCTTTAGCAGCTTTCTTGGTTTTGCTCTTAATTGTTAGATTATACAAATCAAGAAAGCAAGCATTGGATACTTCGTGGAAGTTGACTTCCTTTCAGAGGCTAAGTTTCTCAGAAATGAACATTGTGTCATCTTTGACAGATCATAATATTATAGGCAGAGGCGGGTACGGTACGGTATACCAGGTCCCAGTCGATGATTTAGGCTATGTTGCTGTGAAGAAGATATTCAGTAACAAGAAGTGGGAGCAGAAACTTGAGGATGCTTTCCTAGCAGAAGTTAAGATTTTGAGCAACATTCGTCACAACAATATTGTGAAGCTGTTGTGTTGCATGTCAAATGATGATTCCCTGCTGCTTGTGTATGAATATCTAGAAAACAATAGCCTTGATCGTTGGCTGAACAAGAAGAATAGGTTAAACCATAATTTTGTCCTTGATTGGCCGAAAAGATTGCATATAGCTATTGGAGCTGCACAAGGTCTGACCTATATGCACCATGATTGCCCACATCCGGTTGTTCATCGTGATATTAAAACAAGTAACATCCTTTTGGATTCTGAATTCAATGCAAAAGTTGCAGACTTTGGTCTAGCAAGAATATTGATCAAGCCAAGCGAACTCACCATGTCAGGTGTAGCTGGATCATTCGGCTATATTGCTCCAGAATATATTCAAACAACGAAAATCAATGAAAAGATCGATGTGTATAGTTTTGGAGTGGTGTTGCTGGAACTTACAACTGGGAAGGAAGCGAACCGTGGAGATGAACACTCGTCTCTTGCAGAATGGGCATGGCGACATGTGCATCTAGGCGGAGATGTAGAGGAAGTTCTTGACAAGGAAATTATAGAAGCATGCTATATGGCTGAAATATGCAGTGTCTTCAAACTTGGGGTGATTTGTACTGCAATACTGCCAGCTAGTAGGCCCTCCATGAAGGAGGTTCTGCAACTACTGCTTCGTTGCAGGGATCCGTATGGTTATGGAGAAAGGAGTCCTGGAGTCTTTGATGTTGTCCCCTTCCTGAAGAATTCCAAGAGGGAAAGTAGATTGGATAGTGATGATGATTTATAG 3024 0.413 MPYYLYSIFFFFFFLFFVLSDAETNKYPLYDREHAVLLNIKQHLHPFLNRWTPPNSSHCSWPWINCTDGSVTKLDFGDKNITKTIPPLVCDLKNLTFIDFQFNYFSGEFPKFLYDCPKLEYLDLSQNSFAGPIPNDIDRLANLRFLNLAANYFSGDIPASIGRLKELRNLQLYFCRLNGSIPDEIGDLSNLEFLDLSLNTNLPPTQLPASFTKLKKVKTFSMRSMNLIGKIPESIGEMVSLEELDLSKNGLNGQIPSSLFALKNLSILYLWNNRLSGEIPTEIEALNLTVLDVSENFLTGKIPDGLGKLKKLTVLGLHMNQLSGEIPESLAHLPALVEFKVFENSLSGTLPPYFGRYSPLETFEVATNRLTGKLPEDLCYNGKLVGVSAYDNDLSGELSESLGSCNNSLQYLYLQNNSFSGKIPAGLWTSYNLVTLMINSNKFTGELPKSLAWNLSSLIISNNQFSGRIPVGVSTWKNLVKFEASKNLFNGSIPPELTTLPKLTNLLLDQNQLTGPLPSEIISWKFLSALNLGHNQLSGPIPDSIDRLPNLSQLDLSNNQLSGSVPPQLGKLSMTLTNLNLSSNLFTGKIPSEFENPFYSDSFLNNSGLCADTKKLNLPLCDSGSGLQIERLRKKSSASLALIICLVTVASLAAFLVLLLIVRLYKSRKQALDTSWKLTSFQRLSFSEMNIVSSLTDHNIIGRGGYGTVYQVPVDDLGYVAVKKIFSNKKWEQKLEDAFLAEVKILSNIRHNNIVKLLCCMSNDDSLLLVYEYLENNSLDRWLNKKNRLNHNFVLDWPKRLHIAIGAAQGLTYMHHDCPHPVVHRDIKTSNILLDSEFNAKVADFGLARILIKPSELTMSGVAGSFGYIAPEYIQTTKINEKIDVYSFGVVLLELTTGKEANRGDEHSSLAEWAWRHVHLGGDVEEVLDKEIIEACYMAEICSVFKLGVICTAILPASRPSMKEVLQLLLRCRDPYGYGERSPGVFDVVPFLKNSKRESRLDSDDDL 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2871 1007 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 196 964 - -
Alju02g2871 1007 SMART serkin_6 695 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2871 1007 SUPERFAMILY RNI-like 302 596 - -
Alju02g2871 1007 FunFam Kinase family with leucine-rich repeat domain-containing protein 774 982 - -
Alju02g2871 1007 Gene3D Phosphorylase Kinase; domain 1 666 773 - -
Alju02g2871 1007 Gene3D Ribonuclease Inhibitor 32 138 IPR032675 -
Alju02g2871 1007 Pfam Leucine rich repeat 94 152 IPR001611 GO:0005515
Alju02g2871 1007 Gene3D Ribonuclease Inhibitor 203 348 IPR032675 -
Alju02g2871 1007 Gene3D Ribonuclease Inhibitor 349 625 IPR032675 -
Alju02g2871 1007 SUPERFAMILY RNI-like 70 347 - -
Alju02g2871 1007 ProSitePatterns Protein kinases ATP-binding region signature. 701 724 IPR017441 GO:0005524
Alju02g2871 1007 CDD STKc_IRAK 701 971 - -
Alju02g2871 1007 Pfam Leucine rich repeat N-terminal domain 34 66 IPR013210 -
Alju02g2871 1007 PRINTS Leucine-rich repeat signature 241 254 - -
Alju02g2871 1007 PRINTS Leucine-rich repeat signature 548 561 - -
Alju02g2871 1007 Pfam Leucine Rich Repeat 287 309 IPR001611 GO:0005515
Alju02g2871 1007 SMART LRR_typ_2 548 572 IPR003591 -
Alju02g2871 1007 SMART LRR_typ_2 238 262 IPR003591 -
Alju02g2871 1007 SMART LRR_typ_2 309 333 IPR003591 -
Alju02g2871 1007 SMART LRR_typ_2 140 164 IPR003591 -
Alju02g2871 1007 SMART LRR_typ_2 500 524 IPR003591 -
Alju02g2871 1007 FunFam Leucine-rich repeat receptor-like protein kinase TDR 306 623 - -
Alju02g2871 1007 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 184 284 - -
Alju02g2871 1007 Gene3D Ribonuclease Inhibitor 139 202 IPR032675 -
Alju02g2871 1007 FunFam Receptor-like protein kinase HSL1 675 773 - -
Alju02g2871 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Alju02g2871 1007 ProSiteProfiles Protein kinase domain profile. 695 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2871 1007 SUPERFAMILY Protein kinase-like (PK-like) 686 970 IPR011009 -
Alju02g2871 1007 FunFam Receptor-like protein kinase HSL1 isoform A 30 179 - -
Alju02g2871 1007 Pfam Protein kinase domain 697 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2871 1007 Gene3D Transferase(Phosphotransferase) domain 1 774 977 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2871 Alju-ChrAlju02 42892174 42895291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2871 33 969 Receptor kinase-like Gene Family AT5G25930 53.059 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju02g2871 Pkinase 5.2e-49 CL0016