Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2868 ATGGGAAGAGCGACAAGGTGGTTGAAGGGGTTGTTTGGGATGAAGAAATACCGAGACAAAAAACAGAATTCAAACTCCGACCACCGTGGTAACTTGAAATCTGCGGCGGCGACGTCGGCGGCACCACCACCCAATCATCTTTCACCTGCAGAGGCTGCTTGGCTTCAATCATTCTACGGAGAAACAGAGGACCAGCAGAACAAGCACGCCATTGCGGTGGCCGCAGCCACTGCCGCAGCAGCGGACGCCGCAGTGGCTGCCGCTCAGGCGGCAGTGGCAGTAGTGAGGCTGACCAGTCACAGCAGAACCACCACCATGTTCGCCCGTGGATACGAGAAATTGGCGGCCGTCAAGATTCAAACAGTATTCAGGGGATTCTTGGCAAGGAAGGCATTAAGAGCCCTTAAAGGATTAGTGAAGATTCAAGCACTAGTGAGAGGATTTCTGGTTCGAAAGCAAGCAACTGCAACACTACACAGCATGCAAGCTCTGATTAGAGCTCAAGCCACAGTTCGATCTCATAAAGCTCGTCAGGTCATGAACAAAAACGAAGAATCATACAAATTTGAAACTAAGCCTCGAAGTTCCACGGAGAGATTCGATGAAAGTAGGAGATTATCTTCTTCCTTCGACGCTTCCATGAATAACAACACTAACAGTACCGATGGGAGTCCGACACCAAAGATAGTGGAGGTGGACACAGGCGGCTGCCGGCCGAAGTCAAGGTCTCGCCGGAGCAACACATCAATGTCGGATTTTGGCGACGACCCATTATTTCAAGCAATGTCTTCTCCACTCCCAGTTCCACAAATTCGAACCCCAGCTCGGATATCAACGGCGGCAGATCGGAGGGTTTTGCCGGAGTCAGAGTGGGGACTAACAGGGGAAGAATATAAGTTCTCTACAGCACAGAGCACTCCACGATTCACCAATTCATGTTCATGTGGATCACTTGCCGCTACACCCAAGAGTGTCTGTGCAGAAAGATTGGTGTGGCAATATGGAAACTATCCTAATTACATGGCGAATACTCAGTCTTCGAAGGCGAAACTGAGGTCTCGCAGTGCTCCGAAGCAGCGGCCGGAGTCCTCCGGCGTCGGGCCAAAGAAGAGGCTTTCGTTGAATGAAATGATGGAGTCTAGGAGTAGTTTGAGTGGGATTGGGATGCAGAGGACTTGTTCGAAAGTTCAGGAAGCCATTAATTTCAAGAATGCTGTGATGGGGAAGATTGAGAAATCCGGGGAGATTGGGAGAGATGGTTACTACATGCAGAGGAGGTGGTATGGTGATTGA 1293 0.5035 MGRATRWLKGLFGMKKYRDKKQNSNSDHRGNLKSAAATSAAPPPNHLSPAEAAWLQSFYGETEDQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHSRTTTMFARGYEKLAAVKIQTVFRGFLARKALRALKGLVKIQALVRGFLVRKQATATLHSMQALIRAQATVRSHKARQVMNKNEESYKFETKPRSSTERFDESRRLSSSFDASMNNNTNSTDGSPTPKIVEVDTGGCRPKSRSRRSNTSMSDFGDDPLFQAMSSPLPVPQIRTPARISTAADRRVLPESEWGLTGEEYKFSTAQSTPRFTNSCSCGSLAATPKSVCAERLVWQYGNYPNYMANTQSSKAKLRSRSAPKQRPESSGVGPKKRLSLNEMMESRSSLSGIGMQRTCSKVQEAINFKNAVMGKIEKSGEIGRDGYYMQRRWYGD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2868 430 MobiDBLite consensus disorder prediction 175 266 - -
Alju02g2868 430 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Alju02g2868 430 ProSiteProfiles IQ motif profile. 160 188 IPR000048 GO:0005515
Alju02g2868 430 SMART iq_5 111 133 IPR000048 GO:0005515
Alju02g2868 430 SMART iq_5 134 155 IPR000048 GO:0005515
Alju02g2868 430 Gene3D - 113 153 - -
Alju02g2868 430 MobiDBLite consensus disorder prediction 207 227 - -
Alju02g2868 430 MobiDBLite consensus disorder prediction 18 46 - -
Alju02g2868 430 MobiDBLite consensus disorder prediction 177 206 - -
Alju02g2868 430 MobiDBLite consensus disorder prediction 346 370 - -
Alju02g2868 430 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Alju02g2868 430 Pfam IQ calmodulin-binding motif 139 153 IPR000048 GO:0005515
Alju02g2868 430 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Alju02g2868 430 PANTHER IQ-DOMAIN 5-RELATED 1 376 - -
Alju02g2868 430 Pfam Protein of unknown function (DUF4005) 306 389 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2868 Alju-ChrAlju02 42706483 42707938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2868 1 389 IQD Protein Family AT3G16490 48.756 6.00e-87 268