Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2867 ATGTCAAATTCTCATTCTTTTTGCTTCCTATTTGTTCTTCTTTTCCTTCTACAAAATCCTTCTGCAACATTGTGCCACACCAAGGGACTCAGACCTGGCCGGCATTATTCGGGTCTTGGGTTAGCCATCAACAGGACCCAAATCCAGAATTCGGAGCAGCAATTCATGAGATGGGTTAACTTTGTTGGTAGCCTCAAGCACTCTGTGTTTAAGACTGCAAAAAACAAGCTTTTTCCTTCTTACACTCTTCACGTCTCTAAGAATCCTGCCGTAGCAGATTTTGCAACTATTCAAGAAGCCATTGATTCTCTTCCTTCCATAAATCTCGTGAGAGTGATCATTAAGGTTCATGCAGGTGTTTACACTGAGAAAGTGAACATTCCTCCTATGAAATCCTTCATAACCATAGAAGGAGCAGGAGCAGATAACACTATAGTTCAATGGGGTGACACAGCAAAAACACCAGGTTCCAGAGGACAGCCTTTAGGAACCTATGGTTCTGCAACATTTGCAGTGAACTCACCTTATTTCATAGCCAAGAACATAACATTCAAAAACACAACCCCAGTTCCTGCACCAGGAGCAGTAGGGAAGCAAGCAGTGGCATTAAGAATATCAGCAGACACAGCATCATTCTACGGATGCAAATTCCTAGGAGCACAAGACACATTGTATGACCATGTGGGTAGACATTATTACAAGGATTGTTACCTTGAAGGTTCAGTTGATTTCATATTCGGGAACGGCCTATCTCTGTTTGAGGGATGTCACGTGCATGCAATAGCACAGAACATAGGGGCCTTGACAGCACAAGGAAGAAGCAGCATGTTGGAGGACACAGGGTTCTCATTTGTGCACTGTAAGGTCACGGGTTCAGGAGCACTCTACCTTGGAAGGGCTTGGGGTCCTTTTTCTCGTGTGGTTTTTGCTTACACTTACATGGACAATATCATCATTCCCAAGGGCTGGTATAATTGGGGTGACCCTAATCGTGAAATGACAGTATTTTATGGACAGTACAAGTGTACAGGACCTGGGGCTAGCTTTGCAGGCAGAGTATCATGGTGTAGAGAACTCACCGACGAGGAAGCTCAGCCTTTTATTTCCCTTAGCTTCATTGATGGCGATGAGTGGACTAAATTGTAA 1146 0.4398 MSNSHSFCFLFVLLFLLQNPSATLCHTKGLRPGRHYSGLGLAINRTQIQNSEQQFMRWVNFVGSLKHSVFKTAKNKLFPSYTLHVSKNPAVADFATIQEAIDSLPSINLVRVIIKVHAGVYTEKVNIPPMKSFITIEGAGADNTIVQWGDTAKTPGSRGQPLGTYGSATFAVNSPYFIAKNITFKNTTPVPAPGAVGKQAVALRISADTASFYGCKFLGAQDTLYDHVGRHYYKDCYLEGSVDFIFGNGLSLFEGCHVHAIAQNIGALTAQGRSSMLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVSWCRELTDEEAQPFISLSFIDGDEWTKL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2867 381 SUPERFAMILY Pectin lyase-like 78 380 IPR011050 -
Alju02g2867 381 Gene3D - 79 381 IPR012334 -
Alju02g2867 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 75 379 - -
Alju02g2867 381 FunFam Pectinesterase 79 381 - -
Alju02g2867 381 Pfam Pectinesterase 92 376 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2867 Alju-ChrAlju02 42567085 42571607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2867 92 378 Carbohydrate Esterase AT5G47500 50.694 3.05e-103 307