Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2854 ATGTCTGTGGTTTCAACGCAGCTTAGCTACACAACACCACAGAGAAAGCAGAAGACAGAGCAAGCTCCGATCTCCAGAGCCAACGAAAAGCGCCGGACTCGCGATAACTCAACCCTCCAGAAGATGTCGTGGCAAACCTACGTCGATGACCACCTCATGTGCGAGATCGAAGGTAATCATCTCAGTTCTGCTGCTATCCTTGGTCAAGATGGCAGTGTTTGGGCTCAGAGCGCCACTTTCCCTCAGTTGAAGCCTGAGGAAATCACTGCTATCATGAATGACTTTGCCGAACCTGGATCACTTGCTCCTACTGGATTATATCTTGGTGGCACTAAATATATGGTGATTCAAGGTGAATCAGGAGCAGTCATTCGAGGGAAGAAGGGTCCTGGCGGGGTTACTATCAAGAAGACCACCCAAGCCCTAATCATTGGGATTTATGATGAACCAATGGCTCCTGGTCAGTGCAACATGATAGTGGAAAGGCTTGGTGATTACCTCATTGATCAGGGTCTTTAA 519 0.4836 MSVVSTQLSYTTPQRKQKTEQAPISRANEKRRTRDNSTLQKMSWQTYVDDHLMCEIEGNHLSSAAILGQDGSVWAQSATFPQLKPEEITAIMNDFAEPGSLAPTGLYLGGTKYMVIQGESGAVIRGKKGPGGVTIKKTTQALIIGIYDEPMAPGQCNMIVERLGDYLIDQGL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2854 172 MobiDBLite consensus disorder prediction 1 21 - -
Alju02g2854 172 CDD PROF 43 171 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Plant profilin signature 68 81 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Plant profilin signature 125 140 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Plant profilin signature 42 55 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Plant profilin signature 145 158 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Plant profilin signature 158 171 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Plant profilin signature 93 107 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Plant profilin signature 112 121 IPR005455 GO:0003779
Alju02g2854 172 PANTHER PROFILIN 42 171 IPR005455 GO:0003779
Alju02g2854 172 MobiDBLite consensus disorder prediction 1 38 - -
Alju02g2854 172 FunFam Profilin 42 172 - -
Alju02g2854 172 SMART prof_2 42 172 IPR005455 GO:0003779
Alju02g2854 172 MobiDBLite consensus disorder prediction 22 37 - -
Alju02g2854 172 Pfam Profilin 42 171 IPR005455 GO:0003779
Alju02g2854 172 Gene3D Dynein light chain 2a, cytoplasmic 40 172 - -
Alju02g2854 172 PRINTS Profilin signature 44 53 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Profilin signature 105 119 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Profilin signature 154 171 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Profilin signature 81 101 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Profilin signature 62 71 IPR005455 GO:0003779
Alju02g2854 172 PRINTS Profilin signature 141 154 IPR005455 GO:0003779
Alju02g2854 172 SUPERFAMILY Profilin (actin-binding protein) 43 171 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2854 Alju-ChrAlju02 42254479 42256176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2854 42 172 Cytoskeleton Gene Families AT4G29350 79.389 1.37e-79 230