Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2850 ATGGAGAAGACCTTTCTTCTCTCTTTTCTCTTCCTTCTCTTCCATTTAGCTCCAGCAAAAGCTGATCTTGGTGTTGGCATAGGTATCGGTATCGGCATTGGAAATGGTGGCGGCGGCGGAGACGGTGGTGGGGCTAATAATAGCCCAGGACCGTCTGGACCTTCAGTGTCAAAGATGGACATAGCTTACAAAAGTCTCCAAGCATGGAAATCAGCCATCACTGATGACCCATTAAAGATTCTTGATACTTGGACAGGTTCCAATGTTTGTTCTTATAAAGGAGTCTTTTGTTCCAATTCTTTTGTTGCTGGAATTGATCTCAACCAAGCAAATCTTCAAGGAACTCTCGTTAAAGACCTATCTTTGCTCACTGATATGTCTCTTCTTCACCTTAACAGCAACAGATTCACTGGTACAATTCCTGAAACATTCAAAGACCTTTCATCTTTAGAAGAATTAGACCTCAGTAACAACCAGTTTTCTGGTGAATTCCCCACAGTTATTTTGAACATGCCAAATCTCATTTACTTAGACCTCAGATTCAACTCCTTCTCTGGGACCCTCCCAGATGAACTTTTTAGTAAAAATCTTGACGCAATACTTCTCAACAATAACCAATTCCAAGGCCAAATCCCTCAGAATCTAGCTAGTTCCTCAGCTTCTGTCATCAACCTAGCTAACAACAAGTTCACTGGAACCATCCCAATTTCAAGTTTAGGTTTGGTGGGTACATATAATTCTAAGCTGAAGGAGATTTTGTTCTTAAATAACCAGTTAACAGGTTGTATTCCTCAAGGAGTGGGATTGTTCAGAGATGTGCAAGTTCTTGATGTGAGTTTTAATTCCTTGGTGGGTCATTTGCCAGAAACACTATCCTGTTTGGAAGATATAGAAGTTCTTAACTTGGCTCATAACCAGCTTTCTGGGGAATTATCTGATGTGGTGTGCTCGTTGGAGAGTTTGGTGAATTTAACTGTGGCTTATAATTTTTTCAATGGGTTGAGTCAGGAATGTTCTAGGCTTTTGATTAGGAATGTGGGGTTTGATTTCTCGGATAATTGTATTCCTGGGAGGGACATGCAGAGACCTAAACCAGAATGTTCTGTGATCCCAGGTGGTAGCTTAAGTTGTCTCAGAATTCCCATACCAAAGCCTCTTGATTGTGCTTCATTGGCAATAGCCCAAGCCTTTACCGGGTCTCTACGAAAAAAGAACAAAACAGAACCTTCTGGATCATGCAACACAATTCCACAACTTCTTCAGATACACCATATTTTTCGCCCATCAGCACACAAGTTTGTTTCTTTTAGGACAATCTAG 1320 0.4098 MEKTFLLSFLFLLFHLAPAKADLGVGIGIGIGIGNGGGGGDGGGANNSPGPSGPSVSKMDIAYKSLQAWKSAITDDPLKILDTWTGSNVCSYKGVFCSNSFVAGIDLNQANLQGTLVKDLSLLTDMSLLHLNSNRFTGTIPETFKDLSSLEELDLSNNQFSGEFPTVILNMPNLIYLDLRFNSFSGTLPDELFSKNLDAILLNNNQFQGQIPQNLASSSASVINLANNKFTGTIPISSLGLVGTYNSKLKEILFLNNQLTGCIPQGVGLFRDVQVLDVSFNSLVGHLPETLSCLEDIEVLNLAHNQLSGELSDVVCSLESLVNLTVAYNFFNGLSQECSRLLIRNVGFDFSDNCIPGRDMQRPKPECSVIPGGSLSCLRIPIPKPLDCASLAIAQAFTGSLRKKNKTEPSGSCNTIPQLLQIHHIFRPSAHKFVSFRTI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2850 439 PRINTS Leucine-rich repeat signature 150 163 - -
Alju02g2850 439 PRINTS Leucine-rich repeat signature 294 307 - -
Alju02g2850 439 FunFam Leucine-rich repeat extensin-like protein 1 63 217 - -
Alju02g2850 439 SUPERFAMILY L domain-like 67 355 - -
Alju02g2850 439 Pfam Leucine rich repeat 128 183 IPR001611 GO:0005515
Alju02g2850 439 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 57 390 - -
Alju02g2850 439 Gene3D Ribonuclease Inhibitor 219 358 IPR032675 -
Alju02g2850 439 Gene3D Ribonuclease Inhibitor 167 218 IPR032675 -
Alju02g2850 439 Gene3D Ribonuclease Inhibitor 62 166 IPR032675 -
Alju02g2850 439 Pfam Leucine rich repeat N-terminal domain 64 98 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2850 Alju-ChrAlju02 42209649 42212053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2850 58 379 Leucine-rich Repeat extension Gene Families AT3G24480 50.746 1.05e-105 320