Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2847 ATGATGCACAGTCTGAAGAAGAAGAAGAGCAGTGATCTGATAGACGCCAAGCTGGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGTCCTGCTTGCGGACACAAGTTTCAATCCAAACCCGACTGGGTGGGTCTACCAGCAGGAGTTAAATTCGATCCAACAGACCAAGAACTGATTGAACATCTGGAAGCCAAAGTTGAATCCAAGCACCACATGAAATCTCACCCTCTCATCGATGAGTTCATCCCCACCATTGAAGGCGATGACGGAATCTGCTACACCCATCCCGAGAAACTCCCCGGCGTAACTAGGGACGGGTTGAGCAGGCACTTTTTTCACAGGCCATCGAAGGCGTATACGACGGGGACGAGGAAGAGAAGGAAGATCCAGAACGAGTGTGACAACTTCCAACAAGGAGGAGTAGGAGGAGGAGGAGAAACCAGATGGCACAAAACTGGGAAAACCAGACCAGTTCTGGTAAATGGAAAGCAAAAAGGCTGCAAGAAAATCCTCGTACTCTACACCAACTTTGGCAAGAACAGAAAGCCTGAGAAGACCAATTGGGTTATGCATCAGTACCATTTGGGACAACATGAGGAAGAGAAAGAAGGCGAACTTGTCGTCTCCAAAATCTTCTTCCAGACACAGCCCAGGCAATGCACCACAACCAACAACCCAAATAATACTAATTGGTCGGAGAGGAGCGCGACGACCGGCGAAGAAGCGAGCGGAGATCAGCCGAATAGTAATAGTAGAAGAGAGAGTACAAGTGGGAGTTGTTCTTCTAAAGAAATAGTCACTCATGACGTCTCTACTGTTGCTGTTCCTGTTCCTCCTCCTCCGCCATTAACGTCCTTCACTGCTTCCGCTTTGGATATTCATCATCAGCAACACCTCAAATCCGACCATTTCAGCTTCATTCCATTCAGAAAAAGCTTCGATGAGGTGGGAATTGGAGATGCTTCAAGAGGAAGAGAAGTAGTGCAAGCTTCAGGTTCATCAGCAGAAGAAGTGAATCATCATCATCATCATCATCTACAACAACAGATTACAGCAAATTCTTCAGCATTTCATATGATCAATAGGCCTTCAATTCCTATTTCCACCATTATCTCTCCACCTCCTCCTTCACACCATCACACCTCCATCATCCTTGATGATGTCACCAGATTAATGCTCCAAAATGATCATTTCCAGCAACAACATCATAAACTAGAAGGAAGGTCTGCTTCTGGCTTGGAGGAACTCATTATGGGATGCACTTCAACTAATTCCAAAGAGGAGCCATCTATCACACATTATCAACAAGAAGCAGAATGGTTGAAGTATTCTTCGTACTGGCCTGATTCTGACAATCCAGGTCATCATCATCATGGTTAG 1380 0.4587 MMHSLKKKKSSDLIDAKLEEHQLCGSKQCPACGHKFQSKPDWVGLPAGVKFDPTDQELIEHLEAKVESKHHMKSHPLIDEFIPTIEGDDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDNFQQGGVGGGGETRWHKTGKTRPVLVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFFQTQPRQCTTTNNPNNTNWSERSATTGEEASGDQPNSNSRRESTSGSCSSKEIVTHDVSTVAVPVPPPPPLTSFTASALDIHHQQHLKSDHFSFIPFRKSFDEVGIGDASRGREVVQASGSSAEEVNHHHHHHLQQQITANSSAFHMINRPSIPISTIISPPPPSHHHTSIILDDVTRLMLQNDHFQQQHHKLEGRSASGLEELIMGCTSTNSKEEPSITHYQQEAEWLKYSSYWPDSDNPGHHHHG 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2847 459 ProSiteProfiles NAC domain profile. 45 214 IPR003441 GO:0003677|GO:0006355
Alju02g2847 459 FunFam NAC domain-containing protein 73 54 218 - -
Alju02g2847 459 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 7 346 IPR044799 GO:0003700
Alju02g2847 459 MobiDBLite consensus disorder prediction 218 264 - -
Alju02g2847 459 SUPERFAMILY NAC domain 40 214 IPR036093 GO:0003677|GO:0006355
Alju02g2847 459 Pfam No apical meristem (NAM) protein 46 195 IPR003441 GO:0003677|GO:0006355
Alju02g2847 459 Gene3D NAC domain 54 218 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2847 Alju-ChrAlju02 42140774 42144246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2847 7 452 NAC Transcription Factor Family AT5G56620 51.068 3.85e-134 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g2847 NAM 6.9e-23 No_clan