LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g2838	ATGAGAGATTTGCTTGAAGGGGAGGAAGAAGAGGTGAAGAAGATGAAGAAGGAGTGGACGGCAAACAGAGAGGATTGGTGGGATAGGAAGAAGGGTCTTCGTAGCTCGCCTTACTCCTCCATTCCCTCCATTCTCCTTGCTTCGTCTTCTTCCTTCCTATCCTGTTTTCTGCCTCTTAAGATGGATGACTATCAAGAGATGGAGAGATTTGGTATGGATAATGATTTTGAAGGTGGTGAATGGATTGATGGTGAGTTCTACTATCGGAAGCGCAAGGAAAAACACACCCAAACCAGAGAGGATGTTCTATATGGGGTGTTTGCAGACTCTGATGATGATGAAGACGATTATTCAAACAGAAAACGCAGAAAAGATCGTGACTTATCTAAGAAGCCTGACCTCACCAAGCCTGTGAATTTTGTCTCTACTGGATCTTTTATGCCTAATCAAGATGATAACCATTCTGAAGAACAGATTGAAGAAGAAAATTATGCTCGTGAGGATAGGCCAGGTTTAGGTCTTGGTATGGGAACTGCTAGCACTTCTGGTTCTGGGTTAGGTTTTAATTCCAGTCATCGTGAAAATGCTTCTGATGATGATAATGATGATGACGGTTTTCTGCCTACGGCTTTTGGAAAGAAGATTAAGGAGGGCGCAATGAGAAGGGAGAAGGAAAAGGAGAGAGCAAAATTGGAAAAGAGGAGAGCTCAAGGAAAAACTCAAGCTCAAGATGGATTTTCAGATGTTGGGAAGTTTGAGAAGCATACAAAGGGGATTGGACTGAAGTTGTTGGAGAAGATGGGCTATAAAGGAGGTGGTCTTGGGAAGAATGAACAAGGTATTGTGGCTCCTGTTGAGGCTCATTTGAGGGCCAAGAATACAGGCATTGGATTTAATGACTCGAAGGCAACAACTCCTTTGGCAAGTGTGCAAGTTGAGAAGACAACATTGACAGGAGTTGCTCAACCTACAGCTGTTAGAGCAAAGGAAAGGTTATGGTCAAAGCAATCAAGGTCAAAGAAGAAGAAAGATGAGGATCATTATATTACTGCTGAAGAATTGTTAGCAAGCAATCAAGAACAGGGTCTAGAGGTTGTTCAGAAGGTTTTTGATATGAGAGGGCCACAGGTTCGAGTAATTACAAATTTGTCTGATTTGAATGCTGAGGAGAAGGCTAAGGAAAATGATGTCCCAATGCCAGAGCTTCAGCATAATGTGGGGTTAATTGTTAGGTTGGCTGAAGCAGACATCCAAGAGATTGATAGAAATTTGAGCAGAGAGAGGGAGACAGCACTTAGCTTGAAAAAAGAAAAAGATAAGTTAGAAACTGAGGCAGAACGTCAAAAAAAGCAGTTGGAAGATTTGGAGGAAATAACAAGTGTCCTGGACCGAGTCGGAGAAGAGAACTCAATGGGGACATTGACATTGGATTTGCTTGCACAGTGCTTTGCTGGCCTGCGGAAAAGATATGCTGATAGCTACAAGTTGTGTAACTTGTCATGCATTGCTTGCTCATATGCTTTGCCTTTGTTTATTAGAGTATTCCAAGGATGGGATCCTCTTCAAAATCCATTACATGGGTTAGAGTTGGTATCACTGTGGAAAGCATTGCTTCAAGAAGAAGATTGCCTTGATATCTGGGATGTAACATCGCCTTATACTCAATTGATTTCTGAAGTTGTTTTACCAGCTGTCAGGATTTCAGGTATCAATACCTGGCAGGCACGTGATCCTGAGCCAATGTTACGGTTTTTGGAGTCATGGGAAAAGTTGCTTCCTTCTTCAGTTCTCACAGCCATGTTGGACAATATAGTCATGCCAAAATTGTCAAGTGCTGTAGATACATGGGAACCGCATCGTGAGACTATTCCTATCCATACTTGGGTTCACCCATGGTTGCCTTTGTTGGGACACAAATTAGAGGGCATGTATCAGATGATACGCTTCAAATTGAGTACTGTTCTTGGGGCCTGGCACCCAAGCGATGGCTCTGCTTATGCTATATTGTCACCTTGGAAGACTGTATTTGATTCAGTGAGTTGGGAACAACTCATGCTTCGATTTATTGTGCCAAAGTTGCAGCTTGTCTTGCAAGAGTTCCAAGTGAACCCATCAGATCAGAAACTCGATCAATTTTATTGGGTGATGAATTGGGCTTCTGCTGTTCCAATTCATCTGATGGTTGATATAATGGAAAAGTTCTTCTTCACCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAACCCAAACTTTGAAGAAGTTACAAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAGGAACTTTTGGCCAATGAAAGTATTCGATATCAGCTAAACCGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTAGTCCAACCTGGCCTGAAAGAAAATATCAGCTATCTTAGGGTACTTGAGCAAAGGCAGTTTGAGGCTCAGCAGAAAGCCGCAGCTCATGCTCAAACCCAAGCTCCTTCAGGCTTAGGGGGTGCTGCCCATATGGATGGTGCAGCAGGTGTACAGGAGATGAGCTTAAAGGAAGTCATTGAAGCCCATGCCCAACAACATGGTTTGCTATTCAAGCTTAAACCCGGCAGAATGCACAATGGTCATCAAATATATGGGTTTGGTAATGTCAATATTATAATAGATTCTCTAAATCAAAAGGTATATGCCCAAACCGAGGATGCATGGTCTTTGGAATCTCTCCAAGGCTTACTGGAGCTGCATAATAAGTCTCTTGGTCGGAGACGATGA	2778	0.4269	MRDLLEGEEEEVKKMKKEWTANREDWWDRKKGLRSSPYSSIPSILLASSSSFLSCFLPLKMDDYQEMERFGMDNDFEGGEWIDGEFYYRKRKEKHTQTREDVLYGVFADSDDDEDDYSNRKRRKDRDLSKKPDLTKPVNFVSTGSFMPNQDDNHSEEQIEEENYAREDRPGLGLGMGTASTSGSGLGFNSSHRENASDDDNDDDGFLPTAFGKKIKEGAMRREKEKERAKLEKRRAQGKTQAQDGFSDVGKFEKHTKGIGLKLLEKMGYKGGGLGKNEQGIVAPVEAHLRAKNTGIGFNDSKATTPLASVQVEKTTLTGVAQPTAVRAKERLWSKQSRSKKKKDEDHYITAEELLASNQEQGLEVVQKVFDMRGPQVRVITNLSDLNAEEKAKENDVPMPELQHNVGLIVRLAEADIQEIDRNLSRERETALSLKKEKDKLETEAERQKKQLEDLEEITSVLDRVGEENSMGTLTLDLLAQCFAGLRKRYADSYKLCNLSCIACSYALPLFIRVFQGWDPLQNPLHGLELVSLWKALLQEEDCLDIWDVTSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLTAMLDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGMYQMIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSVSWEQLMLRFIVPKLQLVLQEFQVNPSDQKLDQFYWVMNWASAVPIHLMVDIMEKFFFTKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAHAQTQAPSGLGGAAHMDGAAGVQEMSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVNIIIDSLNQKVYAQTEDAWSLESLQGLLELHNKSLGRRR	925

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g2838	925	MobiDBLite	consensus disorder prediction	114	133	-	-
	Alju02g2838	925	MobiDBLite	consensus disorder prediction	112	245	-	-
	Alju02g2838	925	ProSiteProfiles	G-patch domain profile.	256	301	IPR000467	GO:0003676
	Alju02g2838	925	Pfam	Tuftelin interacting protein N terminal	62	164	IPR022159	-
	Alju02g2838	925	Pfam	G-patch domain	256	297	IPR000467	GO:0003676
	Alju02g2838	925	Coils	Coil	219	241	-	-
	Alju02g2838	925	Pfam	GC-rich sequence DNA-binding factor-like protein	477	743	IPR022783	-
	Alju02g2838	925	Coils	Coil	410	458	-	-
	Alju02g2838	925	PANTHER	TUFTELIN-INTERACTING PROTEIN 11-RELATED	61	912	IPR045211	GO:0000390
	Alju02g2838	925	MobiDBLite	consensus disorder prediction	136	152	-	-
	Alju02g2838	925	SMART	G-patch_5	254	299	IPR000467	GO:0003676
	Alju02g2838	925	MobiDBLite	consensus disorder prediction	206	239	-	-
	Alju02g2838	925	MobiDBLite	consensus disorder prediction	177	192	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g2838	Alju-ChrAlju02	41994143	41999662	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g2838	256	297	C2H2 Transcription Factor Family	AT5G26610	47.619	2.57e-07	51.6