Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2831 ATGATGCTCGGTGAGTCCCATCACACAAATCCGACAGTCCACGTTCCTCCTTGGCCCCTCCACTTTGATGATTTGACCTCGGATATTTGTTCTCCGTACCCGGTCAGTGGTGTTTCCGTCGACTCAGACGGTAATGCGAGCACCGGCGATTACTCGCCGTTTTACGTGCAAGAGGCTCTCTCGGCGCTGCAGCGTTATCTACCCTCCAACGACGCTGATATCGACTCGGACTCTGATGCTACTGGTCGGGACTCTGATGCTCCGGTCGATGCCTACTCCTGCGATCATTTCCGTATGTACGAGTTCAAGGTGAGGAAGTGCCCTCGTGGCAGGTCACATGACTGGACGGAATGTCCTTTTTCCCATCCCGGCGAGAAGGCTCGCCGGAGGGACCCAAGGAAGATTCTCTATTCGGGCACTGCATGCCCTGATTTTCGCAAAGGGAGCTGTAAGAAGGGGGATTGTTGTGAGTTCGCTCATGGAGTATTTGAGTGTTGGCTTCACCCTTCTCGCTACCGTACGCAGCCGTGTAAGGATGGTACGAGCTGCAGGAGAAGGGTATGCTTTTTCGCTCACACGCCGGAGCAACTCAGGATTCTTCCTCCGCAGAGTCCAAGGAGTGCCAACTCTGCAGATTTATACGACGGCTCTCCGTTGAGGCAGGCGATAGAGTTTTCTTGTTCTAAAACTCTGCCGTTCATGTCATCTCCGACTTCGATTTCACCTTCGGCTAGTTCTCCGAGGGAATCTCCTCCTGTGTCTCCGATGGCTCAGTCCCTGAGCCGTTCTGTTTGTTCGAGCTCCATCAATGAGACGGTGGCTTCTCTGTGTAATTTGCAGCTTGGTAAGGCCAAGTCTTTGTCGTTATCCTCCTCTTGGAATGTTCCTATGGGGTCTCCCGGCTTCGGGTCTCCGAGGGGATCCATGCTCCGACCCGGATTCTGCAGCCTCCCTACCACCCCTACGCAGGTGCCAACTCGCGCCGGCGGCAGCTATTTTGATATTTGGGATCAGAGTTGCGAGGAGGAGCCGGCGATGGAGCGGGTAGAGTCCGGTCGGAACATAAGGGCAAAGATGTTCGAGAAATTGAGCAAAGAGAATTCGCTGGAAAGGTCGGATCCGGGTTCTTCGGGTGGGGCTCCAGATGTTGGGTGGATTTCGGAGCTAGTGAAGTGA 1176 0.5451 MMLGESHHTNPTVHVPPWPLHFDDLTSDICSPYPVSGVSVDSDGNASTGDYSPFYVQEALSALQRYLPSNDADIDSDSDATGRDSDAPVDAYSCDHFRMYEFKVRKCPRGRSHDWTECPFSHPGEKARRRDPRKILYSGTACPDFRKGSCKKGDCCEFAHGVFECWLHPSRYRTQPCKDGTSCRRRVCFFAHTPEQLRILPPQSPRSANSADLYDGSPLRQAIEFSCSKTLPFMSSPTSISPSASSPRESPPVSPMAQSLSRSVCSSSINETVASLCNLQLGKAKSLSLSSSWNVPMGSPGFGSPRGSMLRPGFCSLPTTPTQVPTRAGGSYFDIWDQSCEEEPAMERVESGRNIRAKMFEKLSKENSLERSDPGSSGGAPDVGWISELVK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2831 391 MobiDBLite consensus disorder prediction 235 258 - -
Alju02g2831 391 MobiDBLite consensus disorder prediction 365 391 - -
Alju02g2831 391 Gene3D - 136 199 - -
Alju02g2831 391 PANTHER UNKEMPT FAMILY MEMBER 57 391 IPR045234 -
Alju02g2831 391 SMART c3hfinal6 171 194 IPR000571 GO:0046872
Alju02g2831 391 SMART c3hfinal6 136 162 IPR000571 GO:0046872
Alju02g2831 391 FunFam Zinc finger CCCH domain-containing protein 66 94 162 - -
Alju02g2831 391 ProSiteProfiles Zinc finger C3H1-type profile. 136 163 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2831 Alju-ChrAlju02 41099529 41100704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2831 92 255 C2H2 Transcription Factor Family AT5G12850 56.395 1.02e-54 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju02g2831 None None None