Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2820 ATGGGTATTTGCTTCAGCATTGACTCTGATACAAAGGCCCCAGGATATGAACCTGTCACACCAACAACTAAGCAAGATAGAAGCAGAAGCTACAGTTCATCATCTCCTATGAATATCAAAGATCTCCGCCGAAGTCTTGGCCATAGGAATGTTGACATATTTTCCTATGGTGAACTGAGGTTGGCCTCCAAGCACTTTCGTCCAGACTTAATTCTGGGAGAGGGTGGTTTTGGAGTTGTGTATAAAGGCGTGATAGATGAAGATGTAAGGCCAGGTTACAAGACCACACAAGTTGCTATTAAGGAGCTAAATCGAGAAGGAATTCAGGGTGATAGGGAATGGCTGGCTGAAGTTAACTATTTAGGCCAGTTCAGTCACCCAAATCTTGTGAAGCTTATTGGATATTGTTGTGAGGATGAACATCGGTTGCTGGTCTATGAATACATGGCAAGTGGGAGCTTGGAAAAACACCTCTTTCGCAGAGTGGGCTCCATGCTGACTTGGTCAAAAAGAATGAAGATTGCTTTACATGCTGCAAAAGGACTTGCTTTTCTTCATGGTGCAGAGAGGCCCATCATATATCGTGACTTCAAGACATCAAATATTTTGCTTGATGCGGATTTCAACGCAAAGCTTTCAGACTTTGGTCTTGCAAAGGATGGACCTATGGGAGACCAAACCCATGTTTCAACACGTGTGATGGGCACCTATGGATATGCTGCGCCTGAGTATGTGATGACTGGGCATTTAACAGCTCGAAGCGATGTGTATGGTTTTGGGGTGGTTCTACTTGAGTTGCTTATTGGAAGGAGAGCATTAGACAAGAGCAGGCCAAGCAGACAACACAACTTGGTTGAGTGGGCACGTCCACTGTTGAGTCATAATAAGAAACTTCTTAAAATCTTAGATCCTAGAATGGATGGCCAATACTCAGCTAAAACTGCCATAAAGGTGGCTCATCTGGCAAACCAATGTCTTAGCCAAAACCCGAAAGGCAGGCCTCTAATGAGTCAGGTTGTTGAAATTCTTGAAAATTTCCAGTCAAAGGAGGAAAATGAAGAAGAGCAAATGCTTCGAGTTGGCAGTAGCAGTATAACCCTTTATGAGGTTCCAAAGGACACTATAGAAACTCCAGCAACTGGGAAAAGCCAATGTGAAAATGATAGGGCTTATAGAAGTGAATGA 1185 0.4346 MGICFSIDSDTKAPGYEPVTPTTKQDRSRSYSSSSPMNIKDLRRSLGHRNVDIFSYGELRLASKHFRPDLILGEGGFGVVYKGVIDEDVRPGYKTTQVAIKELNREGIQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSMLTWSKRMKIALHAAKGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSRQHNLVEWARPLLSHNKKLLKILDPRMDGQYSAKTAIKVAHLANQCLSQNPKGRPLMSQVVEILENFQSKEENEEEQMLRVGSSSITLYEVPKDTIETPATGKSQCENDRAYRSE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2820 394 MobiDBLite consensus disorder prediction 372 394 - -
Alju02g2820 394 MobiDBLite consensus disorder prediction 14 38 - -
Alju02g2820 394 SUPERFAMILY Protein kinase-like (PK-like) 46 344 IPR011009 -
Alju02g2820 394 CDD STKc_IRAK 72 346 - -
Alju02g2820 394 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
Alju02g2820 394 ProSiteProfiles Protein kinase domain profile. 66 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2820 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Alju02g2820 394 Gene3D Transferase(Phosphotransferase) domain 1 149 367 - -
Alju02g2820 394 ProSitePatterns Protein kinases ATP-binding region signature. 72 101 IPR017441 GO:0005524
Alju02g2820 394 MobiDBLite consensus disorder prediction 16 38 - -
Alju02g2820 394 FunFam Serine/threonine-protein kinase BIK1 33 148 - -
Alju02g2820 394 Pfam Protein tyrosine and serine/threonine kinase 71 343 IPR001245 GO:0004672|GO:0006468
Alju02g2820 394 FunFam Probable serine/threonine-protein kinase PBL8 149 362 - -
Alju02g2820 394 PANTHER OS01G0588500 PROTEIN-RELATED 33 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2820 Alju-ChrAlju02 38937147 38944101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2820 54 343 Glycoside Hydrolase AT3G07070 51.195 7.15e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju02g2820 PK_Tyr_Ser-Thr 1.5e-47 CL0016