Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2819 ATGGCACTTCGTGGTACAACTTATTATAATTCATGTTTTCGAGTGATCATATTGATGCTTCTCTTCTTATATGGCATTAATGTTCGCTCCTGTTTTGGTTCTTCAGAACCAGAATTGCTGCTCAAGTTCAGGCACTCTTTACAATACGAAAACGACAGTGTGTTTTCCACTTGGAATACGTCTATTTCGCCGCCGTGTTCTGGTGATAGTCCCAATTGGGTCGGAGTTCTTTGTACAGAAGGAGGCAAAATCTCGGGACTGATACTTGAGAATATGGGACTGAAAGGTCTCATTGATGTGGACGTTCTTCAACAGTTGCCTAATCTCAGAACCCTAAGTTTCAATAACAACAATTTCAATATTACTTGGCCGGAATTGAACAAGCTCTATCCTCTCAAGACATTTTATCTTTCAAATAATAAGTTTTATGGAGAGATTCCTGCTCGGAGTTTTCAGAGTATGAATTGGTTGAAGAAAGTTCATTTAGCGAATAATCAGTTCTCTGGTGAAATTCCCACTTCATTAGCCATGTTACCTAGGCTTATGGAGCTGAGATTAGAGGGAAACAAATTCAGTGGCCGAATTCCCAACTTTCTGCAGAAGAACTTGAAATCTTTTAGTGTAGCCAACAATCAGTTGCAGGGTAAAATACCTGCCAGTCTTAGTGAACTTCCCGTCTCATCCTTCTCCGGCAATGAAGGATTATGTGGGACTCCATTGAGTGCGTGTCATTCCTCCAAAAGCCCCTCAATCATCACTGTTGTGTTGATTGCCATAGCGGTGGGCGTGGCAGTAATGATCATAGGATTACTAATCTTTCTCTTTCGTTGGAGAAAAAGACGGCGAAAGGCAGTGTCGGTGGAGATTCCGCAATCAAATCAGATAAGGAGGACTCATTTCAAGGAGGCAGATGAAGTGAGTAATCACTCAAGAACATCACAGGTTTCCAATCACAGCAGAAGATCAGAGAACATAAAGTTGTGCTTTGTAAGAGGAGACAGAGAGAAATTTGATTTTCATGAGTTACTAAGAGCCTCAGCTGAAATTTTGGGCAGTGGCAGCTTCAGTTCTTCGTATAAGGCTGCTCTGCTGAATGGCTCAATGATGGTGGTGAAGAGGTTTAAGCAAATGAACAATGTTGGGAAGGAAGAGTTTCAGGAACACATGAGGAGGATAGGAAGGTTGGATCACCCTAATTTGCTTCCTCTGGTGGCTTACTATTACAGAAAGGAGGAGAAACTGTTGGTTACAGACTATGTTCAAAATGGTAGCTTGGCAGTTCGCCTTCATGGACCCCATGATGCAGGAAAGGCAGGCCTTGATTGGCCAACACGATTGAAGATTGTGAAAGGAATCACAAAATGTCTTGAATATCTCTACAAGGAACTGCCAAGTCTAATTGCACCCCACGGGCATCTCAAATCTTCAAATGTTCTTCTTACTCAGTCTAATGAGCCCCTTTTAACAGACTACGGCTTAGTTCCAGTAATAAACCAAGATCTTGCTCAGGACATGATGGTCATTTATCAGTCCCCTGAGTATACACAAGAGGGTCAGATTACAAAGAAGACCGATGTATGGAGTCTTGGGGTACTAATTTTGGAGATATTGAGTGGGAGATGTGCAGGTAAAGGAGAGATGGATTTGGTTAGTTGGGTGAAATGTGTGGAGCCTGAGGATTGGAGTAGTGAGGTTTTGGATAAAGAAATGGGAGGAACAAGGAACAGTGAAGGGGAGATAGTGAAGCTTTTGAGGATTGCGTTGTGTTGTTGTGAAGATGTTAATAACAGACTGGATTTGAAAGAAGTGGTTGAGAAAATTCAAGAAGTGAGGGAGAGGGAACATGATGATGATTTCTATTCATATGCTAGTGAAGCTGAAACTCATCACTCTTCAGCCACAATGTCTGATGAAATCAATTTCCCCTTTAATGCTTGA 1938 0.4185 MALRGTTYYNSCFRVIILMLLFLYGINVRSCFGSSEPELLLKFRHSLQYENDSVFSTWNTSISPPCSGDSPNWVGVLCTEGGKISGLILENMGLKGLIDVDVLQQLPNLRTLSFNNNNFNITWPELNKLYPLKTFYLSNNKFYGEIPARSFQSMNWLKKVHLANNQFSGEIPTSLAMLPRLMELRLEGNKFSGRIPNFLQKNLKSFSVANNQLQGKIPASLSELPVSSFSGNEGLCGTPLSACHSSKSPSIITVVLIAIAVGVAVMIIGLLIFLFRWRKRRRKAVSVEIPQSNQIRRTHFKEADEVSNHSRTSQVSNHSRRSENIKLCFVRGDREKFDFHELLRASAEILGSGSFSSSYKAALLNGSMMVVKRFKQMNNVGKEEFQEHMRRIGRLDHPNLLPLVAYYYRKEEKLLVTDYVQNGSLAVRLHGPHDAGKAGLDWPTRLKIVKGITKCLEYLYKELPSLIAPHGHLKSSNVLLTQSNEPLLTDYGLVPVINQDLAQDMMVIYQSPEYTQEGQITKKTDVWSLGVLILEILSGRCAGKGEMDLVSWVKCVEPEDWSSEVLDKEMGGTRNSEGEIVKLLRIALCCCEDVNNRLDLKEVVEKIQEVREREHDDDFYSYASEAETHHSSATMSDEINFPFNA 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2819 645 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 613 IPR046959 -
Alju02g2819 645 Pfam Leucine rich repeat 132 191 IPR001611 GO:0005515
Alju02g2819 645 FunFam pollen receptor-like kinase 1 312 419 - -
Alju02g2819 645 Gene3D Transferase(Phosphotransferase) domain 1 420 631 - -
Alju02g2819 645 Gene3D Ribonuclease Inhibitor 35 200 IPR032675 -
Alju02g2819 645 SUPERFAMILY L domain-like 62 225 - -
Alju02g2819 645 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2819 645 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Alju02g2819 645 CDD TM_EGFR-like 245 283 - -
Alju02g2819 645 Gene3D Phosphorylase Kinase; domain 1 308 419 - -
Alju02g2819 645 Pfam Protein kinase domain 347 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2819 645 SUPERFAMILY Protein kinase-like (PK-like) 348 609 IPR011009 -
Alju02g2819 645 Gene3D Ribonuclease Inhibitor 201 244 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2819 Alju-ChrAlju02 38930346 38933639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2819 1 641 Receptor kinase-like Gene Family AT5G35390 49.110 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju02g2819 Pkinase 4.5e-28 CL0016