Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2789 ATGTTGGCGATGGAGAAGGATTTTGATTCCAAGTTGAGGATTCATAGTAATTCGTCTAGTGATGGGAGTGTTCAGAGATCTCAGAGCATTCCTTTCCGAGCTCCTCAGGAGAATTGCACCATCCAGGACTTTGACTTGGGAAAGATCTACGGCGTTGGTTCTTATTCTAAGGTTGTGAGAGCAAAGAAGAAGGACACAGGATCTGTATATGCATTGAAGATCATGGACAAAAAGTTTATCACCAAGGAGAACAAAACAGCTTATGTGAAGTTGGAACGGTTAGTGCTTGATAAATTGGATCATCCTGGTATTGTGCGGCTGTTTTTCACATTTCAAGACACTTTTTCTCTGTACATGGCACTTGAATCCTGCGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGGTTGTCTGAGGATGAAGCACGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAGTACATACATAATTTGGGCTTGATACATCGTGATGTCAAGCCGGAGAACTTGCTGCTTACTGCTGAAGGACATATTAAAATAGCTGATTTTGGGAGCGTAAAGCCTATGCAGGGTTGCCAAATCGTAGACTTCCTTCCAAATGCAGCATCAGATGATAGAGCCTGCACATTTGTGGGGACAGCTGCTTATGTCCCGCCAGAGGTTCTTAATTCTTCTCCAGAAACATTTGGAAATGACCTCTGGGCCCTTGGATGCACATTATACCAAATGCTGTCAGGAACTTCTCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATCATAGCTAGAAATATTCAATTTCCGGACTATTTTTCAGATGAGGCAAGGGACCTTATTGATCGGTTACTGGATTTGGATCCCAGTAGGAGGCCAGGTGCCGGACCTAATGGTTATACTGTTTTGAAAAGGCATCCATTTTTCAAGGGAGTGGACTGGAGTAAAATTAGGGATCAAATCCCCCCAAAACTTGCTATGGAACCTGGGCCACCTGAAGGTGATGATGTTTACGATTCGTCATGGAACCTTTCTCACGTTGGTGATAGTTCTAGGCAACCTGATGGAAATATTGGTGCCGCATCATCTGAGGAGTTTGGTCACATAACTAGGCTAGCCTCAATAGATTCTTTTGATTCAAAGTGGCAACAATTTTTGGATCCTGGTGAATCTGTTATTATGATCTCAATTGTAAAAAAGATGCAGAAATTAACAAGCAAGAAGGTGCAGCTTATCCTTACTAACAAACCAAAGCTAATCTATGTGGATCCATCAAATCTTATTGTGAAGGGAAATATAATGTGGTCTAATAATCCAAATGAATTAAGCATTCAAGTGACAAGTCCATCTGGTTTCAAGATTTGCACGCCAAAAAAGGTATTGTCATTTGAGGATGCCAAGCAAAGAGCATATCAGTGGAAGAAAGCAATTGAAGGGCTACAAAACCGGTGA 1461 0.4155 MLAMEKDFDSKLRIHSNSSSDGSVQRSQSIPFRAPQENCTIQDFDLGKIYGVGSYSKVVRAKKKDTGSVYALKIMDKKFITKENKTAYVKLERLVLDKLDHPGIVRLFFTFQDTFSLYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHNLGLIHRDVKPENLLLTAEGHIKIADFGSVKPMQGCQIVDFLPNAASDDRACTFVGTAAYVPPEVLNSSPETFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARNIQFPDYFSDEARDLIDRLLDLDPSRRPGAGPNGYTVLKRHPFFKGVDWSKIRDQIPPKLAMEPGPPEGDDVYDSSWNLSHVGDSSRQPDGNIGAASSEEFGHITRLASIDSFDSKWQQFLDPGESVIMISIVKKMQKLTSKKVQLILTNKPKLIYVDPSNLIVKGNIMWSNNPNELSIQVTSPSGFKICTPKKVLSFEDAKQRAYQWKKAIEGLQNR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2789 486 SUPERFAMILY Protein kinase-like (PK-like) 22 341 IPR011009 -
Alju02g2789 486 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 336 - -
Alju02g2789 486 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Alju02g2789 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Alju02g2789 486 MobiDBLite consensus disorder prediction 325 364 - -
Alju02g2789 486 MobiDBLite consensus disorder prediction 346 361 - -
Alju02g2789 486 Pfam Protein kinase domain 48 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2789 486 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Alju02g2789 486 FunFam 3-phosphoinositide-dependent protein kinase 1 357 486 - -
Alju02g2789 486 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Alju02g2789 486 Pfam PH domain 383 485 IPR033931 -
Alju02g2789 486 Gene3D - 361 486 IPR011993 -
Alju02g2789 486 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
Alju02g2789 486 MobiDBLite consensus disorder prediction 15 29 - -
Alju02g2789 486 MobiDBLite consensus disorder prediction 1 29 - -
Alju02g2789 486 Coils Coil 466 486 - -
Alju02g2789 486 Gene3D Transferase(Phosphotransferase) domain 1 128 328 - -
Alju02g2789 486 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2789 486 SUPERFAMILY PH domain-like 306 485 - -
Alju02g2789 486 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2789 Alju-ChrAlju02 37087571 37095189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2789 1 486 AGC Kinase Gene Family AT3G10540 79.346 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Alju02g2789 Pkinase 7e-65 CL0016