Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2780 ATGGCCTCGCCGATACCAAGTAGCTCTCGATCAACTTCTCTCAGGGATGACGACTCCGACACTGCCAAGCTCGAAGGCACCGGTAGCTGGGACGCCCTCGAATGGACCAAAATTGAGCCCATCATACGCCCCGTTTCGCTGGAAAATTTGGATTTCTTGCTTGAGGCTGAGCAAGTCAAAGCCCAAGAATATGGTGTTTTGCTTGTTAATAACAATGATGTGGGTACATTAATGGTTACAAATTTTCGCCTCTTATTTGTGAGTGAGAAAACCACAAAAGTTATTGCCCTTGGAACAATACCCCTTGCAACAATCGAGAAGTTTACCAAGATAGCTGTGAAGACTCAACCAACTCTTCGGCAGTTAGACAAAACACTATCACAGAGATTGCTCCAAGTCATTGGAAAGGATATGAGAATTATTGTTTTTGGTTTCAGACCTCGTACAAAACAGAGACGTGCAATATTTCAAGCATTACTGAGATTGACAAAACCTGCAAGATTTTGGGATCTCTATGCTTTTGTATCAGGGCCTTCTAGATTAAACAACTCAAACGCAAAAGTTCGCTTACTGGATGAGTATTTTCGACTTCTTGGGAAAGGATCTTATCGTGGATCAATCAATATGATCAAAAGTGGGTCCTTTACCTTGTCAAATACGTCTTGGAGAATAAGTAGTGTGAATTCCAACTATACTATGTGTCAGACTTATCCATTTGCATTGATTGTTCCTAAGAGCATTAGTGATGATGAAGTGCTCCAGGCTTCCACTTTTCGGGCAAGATGTCGGTTGCCTGTAGTCTCATGGTGTGATCCTGGTTCTGGTGCTGTCCTTGCTCGATCATCCCAACCCTTGGTTGGTCTCATGATGAATATGAGAAGCAACACAGATGAAAAGCTTGTGGCTGCACTTTGCAACAAATTGGATGATGGTTCACGGAGGAAGCTATATATTTCTGACGCAAGACCAAGGAAAAATGCATTAGCTAATGGGGCCATGGGAGGTGGTTCAGAGTCGTCATCAAATTATTTTCAATCTGAGATAGTCTTCTTTGGGATAGACAACATCCACGCAATGAGGGATAGCTTTGCTAGACTTAGAGAGTACTTAGATACTTATGGAAGAACATCATCAGATGGAATGTCATCTTTATTGAGGAATGGTGGGTGGACATGGGGTGGAGGATTACTAAGTAGTATGTCTGCTTCAGTATCAATGCTTGGGGACAGTGGATGGTTGCCGCACATTCAAAATGTCTTGGCTGGTTCAGCTTGGATTGCTGCTCGTGTTGCTATTGAAAAGGCCTCTGTGCTTGTACATTGCAGTGATGGGTGGGATAGAACAACTCAATTGGTTTCACTTGCTAGTTTGTTGCTTGATCCATACTATCGGACGTTCAAAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCATCCATTCTCAGATCGCGTTGGAATGCCATTATTCACTAGCATTGGCAACACACCTTCTGAGTTGTCTTGGCATTCTTCAGGAAATCACCCATCACCACCCATGAATCAATCATCAGGAGCATTCAGTTCCCAACCTCCAACCTCTCATGCACAAACTTTAAACAACTACTCTCCAATTTTCCTTCAGTGGGTGGATTGTGTTTCACAATTGCTGCGGACATATCCTTTTGCTTTTGAGTTCTCCTCCGCTTTCCTGGTGGACTTCTTAGACTGTGTGCTTTCTTGCCGCTTTGGAAACTTTTTATATAACAGTGAGAAGGAAAGGCAGCAATTGAATGTTTTTGAAGCTTGTGGATGTTTGTGGGCGTACCTAGCTGAGTTGCGTGCTTCAGATAGGGGTTCTCATGTGCATTACAACCTCTTTTATCAACCGTCAAAGCATAATGGTCCTCTTCTACCTCCAGCAGCAGCTTTGGCCCCAACTTTGTGGCCCCAATTTCATCTTCGTTGGGTTTGTCCTGAAGAATCACAGGCTGGGCAGATTGAAGTAGAATGTAGGAAGATGGCTTTAAATTTCTCTGAGATGAGGAAGGCTAAAGAAGTGGCAGAGAGGAAAGCCAAAGAAATTGCAAATGCCATGGAATCACTGAAATTAGAACATAGAAACGAGAAGCAACTTAGAATATCAGCAATGAATATAGCCAAAAGGAAAAACAAAGAAAATGTGGTAATGAAGAGGGCAATTCAGTCAATTGGATGCAAAGTTTGCTTCTCTAGCAGCGATGACAATATTGTTGATATTGAGATCTGCCCAGCTGAAGCAGCACAAAACTTGAAATATTCTCTAACCAGAAAGGAATTTGATGATAAAAAGGATTTGTCTGCTTCAGAAACAATTACAGAAGATGACAATGACGCAAACAATGCTTTTAGTCAAGTATGTGAAAATCTATGCCCTTTCCGTACCCAAGACGGACGCTGCAGGTGGCCCAGTGCCACTTGTGCTCATCGTGGCAGCCAGTTTGTTGGTCTAAAGGCAAATTTTGATGCTCTTGATCAACTCTTAATTGATGATGATTATTTCAAGCCTGAGTGA 2541 0.4258 MASPIPSSSRSTSLRDDDSDTAKLEGTGSWDALEWTKIEPIIRPVSLENLDFLLEAEQVKAQEYGVLLVNNNDVGTLMVTNFRLLFVSEKTTKVIALGTIPLATIEKFTKIAVKTQPTLRQLDKTLSQRLLQVIGKDMRIIVFGFRPRTKQRRAIFQALLRLTKPARFWDLYAFVSGPSRLNNSNAKVRLLDEYFRLLGKGSYRGSINMIKSGSFTLSNTSWRISSVNSNYTMCQTYPFALIVPKSISDDEVLQASTFRARCRLPVVSWCDPGSGAVLARSSQPLVGLMMNMRSNTDEKLVAALCNKLDDGSRRKLYISDARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRDSFARLREYLDTYGRTSSDGMSSLLRNGGWTWGGGLLSSMSASVSMLGDSGWLPHIQNVLAGSAWIAARVAIEKASVLVHCSDGWDRTTQLVSLASLLLDPYYRTFKGFQALVEKDWLAFGHPFSDRVGMPLFTSIGNTPSELSWHSSGNHPSPPMNQSSGAFSSQPPTSHAQTLNNYSPIFLQWVDCVSQLLRTYPFAFEFSSAFLVDFLDCVLSCRFGNFLYNSEKERQQLNVFEACGCLWAYLAELRASDRGSHVHYNLFYQPSKHNGPLLPPAAALAPTLWPQFHLRWVCPEESQAGQIEVECRKMALNFSEMRKAKEVAERKAKEIANAMESLKLEHRNEKQLRISAMNIAKRKNKENVVMKRAIQSIGCKVCFSSSDDNIVDIEICPAEAAQNLKYSLTRKEFDDKKDLSASETITEDDNDANNAFSQVCENLCPFRTQDGRCRWPSATCAHRGSQFVGLKANFDALDQLLIDDDYFKPE 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2780 846 MobiDBLite consensus disorder prediction 503 531 - -
Alju02g2780 846 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 217 653 IPR029021 -
Alju02g2780 846 SUPERFAMILY PH domain-like 53 175 - -
Alju02g2780 846 Pfam Myotubularin-like phosphatase domain 172 591 IPR010569 -
Alju02g2780 846 CDD PTP-MTM-like 262 551 - -
Alju02g2780 846 ProSitePatterns Tyrosine specific protein phosphatases active site. 439 449 IPR016130 GO:0016311|GO:0016791
Alju02g2780 846 Gene3D - 59 163 IPR011993 -
Alju02g2780 846 ProSiteProfiles Myotubularin phosphatase domain. 199 649 IPR010569 -
Alju02g2780 846 Coils Coil 677 708 - -
Alju02g2780 846 PANTHER MYOTUBULARIN-RELATED 54 764 IPR030564 -
Alju02g2780 846 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2780 Alju-ChrAlju02 36554041 36591166 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2780 1 846 Protein tyrosine phosphatase (PTP) family AT3G10550 64.387 0.0 1107