Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2761 ATGAGTATGGAAAGCCTTGCATCGAGCTTCAGTCAAGAACATGGCCTCATCAACCAATCTTTCTTCTCTGGGTCTCTTCCTTATTACCAGACGCCATCATCGAGTAGTACAGTGATGGTTTCAAAATCACCAAAGGCATCAAATTTAAGCAACAGGAAGCCATCTATAAATATCACCATCCCTCCTATGGGCTTAATAAGGATGAGCTCATCGATGACGACATCATCGGATGTCGTCGCGGAGAACAACGACAGGCACTACCGAGGAGTTCGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGTGACCCAAATCGAAGGGGATCAAGGGTTTGGCTTGGGACCTTCGATACAGCCATGGAAGCAGCAAAAGCATATGACAGAGCTGCGTTTAAGATGAGAGGAAGCAAAGCTATACTCAATTTCCCTCTTGAGGTTGGATCAAGTTTTGAAGAATCTAATATGCCAACAGAGGAAAAAGTGGTTGGTGAGAAAAGAGGAAGAGAGAAAGAAGAAGAGAGTGAACAGGAAAAGAATGAAGAATTTAAGAAGACGAAGAAGAAGGAAGAGGAGGAGGAAGAGGCAGTTTCACCCACCGGCGGGGTTGTTTCTTCTTCTCCGTCTTCTTCTTCGGCGACGGTTGGTCCGTTAACGCCGTCATGTTGGAATGGGTTTTGGGATACAGAGGTGGCCAACACTATTTTCAGTGTTCCTCCGTTATCGCCGTTATCTCCTCCCATGATGGTTGTGAGGTAG 759 0.473 MSMESLASSFSQEHGLINQSFFSGSLPYYQTPSSSSTVMVSKSPKASNLSNRKPSINITIPPMGLIRMSSSMTTSSDVVAENNDRHYRGVRRRPWGKFAAEIRDPNRRGSRVWLGTFDTAMEAAKAYDRAAFKMRGSKAILNFPLEVGSSFEESNMPTEEKVVGEKRGREKEEESEQEKNEEFKKTKKKEEEEEEAVSPTGGVVSSSPSSSSATVGPLTPSCWNGFWDTEVANTIFSVPPLSPLSPPMMVVR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2761 252 Coils Coil 169 196 - -
Alju02g2761 252 MobiDBLite consensus disorder prediction 152 219 - -
Alju02g2761 252 SMART rav1_2 86 150 IPR001471 GO:0003700|GO:0006355
Alju02g2761 252 CDD AP2 86 144 IPR001471 GO:0003700|GO:0006355
Alju02g2761 252 SUPERFAMILY DNA-binding domain 86 146 IPR016177 GO:0003677
Alju02g2761 252 Pfam AP2 domain 86 136 IPR001471 GO:0003700|GO:0006355
Alju02g2761 252 PRINTS Ethylene responsive element binding protein signature 110 126 IPR001471 GO:0003700|GO:0006355
Alju02g2761 252 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Alju02g2761 252 ProSiteProfiles AP2/ERF domain profile. 86 144 IPR001471 GO:0003700|GO:0006355
Alju02g2761 252 FunFam Ethylene-responsive transcription factor 2 85 146 - -
Alju02g2761 252 MobiDBLite consensus disorder prediction 200 219 - -
Alju02g2761 252 MobiDBLite consensus disorder prediction 158 196 - -
Alju02g2761 252 PANTHER DNA-BINDING DOMAIN 52 193 IPR044808 GO:0003700|GO:0009873
Alju02g2761 252 Gene3D AP2/ERF domain 85 146 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2761 Alju-ChrAlju02 35423051 35423809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2761 4 251 AP2-EREBP Transcription Factor Family AT5G61600 42.248 9.36e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju02g2761 AP2 8.9e-16 CL0081