Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2733 ATGGGGTTAGTTCAGATAAACAATGTTGAGGATTTTGTGAATATTAATCCAAAACGACCAGCAGAACTAAATCAGCATATGCAAGATGAACAAAACAAGGTTATTAGGGGTGGGATTACAGGAGAGGGACAAGATCTATCCATGGAAGATGAGTCAAGGATCTATGACAATATTATTATTGGAGATTATCAAAATAATCACGAGAGTCATCACATCAATAATCAAGGAGATCATCATAATAATGTTGTAAAAAAGAGCACTAAACAACAAATCCAAGGGCCTTTGGTTCGTTGGGAGAGGTTCTTGCCTGTTAGATCATTGAGGGTGTTATTGGTTGAAAATGATGATTCAACTCGCCACGTGGTCTGTGCTTTACTTCGCAACTGTGGATATGAAGTTGAAGCTGTTGAAGATGGTCAACAAGCTTGGAAGATCCTTGAAGATCTCAGTGCTAATATTGATCTTGTTTTGACAGAGGTAGCCTTGCCATCTTTAACAGGCATTGGCCTCCTATCCAAGATTATGAGCCACAAGACGCGTAAAAATATTCCAGTGATTATGATGTCATCTCATGATTCTATGAATATAGTATTTAAATGTTTATCCAGGGGTGCAACTGACTTTTTAGTCAAGCCATTACGAAAGAATGAGCTAAAAAACCTTTGGCAGCATGTTTGGAGGAAATGCCATAGCTCTAGTGGTAGTGGAAGTGAAAGTGGTGTGCGTGCACAAAAGTCATTGAAGTCAGAAAGTGGAGAACATTCAGACAACAAGCATGGCAATTGTGATGAAGATGACATTGGTAGCATTGGATTGAATGCAAGAGATAAAAGTGATAATGGAAGTGGCACCCAGGTCATTAATCTACAGAGTTCTTGGACCAAGATGGCAGTTGAAGTTAATAGCCCACGACCAATGTCTCTTTGGGAACAATTAGGGGATCCACCTGTAGGTAGCACTTGTGCACAAGTTATTCATCCAACGCCTAAAACAAATGCCAACGATAAAGTGGTTACCACGAAGGATTGTGAGACACAAGATGAATTGAACATGATGACTGGCATAGATTTGGAGATAACACCATCTAGATCAATCCGGACATTGGAACCTTGTGGACAAAGAGAAGAAGTTCCATCAAAATTTGTTGCTTCTAACATTAATAAAAGCTATGAGAAGGAAAAAGTTGATGAAAAAGAAGAGAAGGGACAAGAAGAGCAAAATAGCAATGAAAGATTAGTTGGAGAATCGAAAAACCAAGCAACTGATCCAACAAGTGCTTTCAATAACATTAATTCTAATTCCGATCCCATCTTAGAAATACAATGTCTAGAGAACCCAAATGGAATGGTCTCTAATGTAGAAGATAACAATATATATGGAAACAAGGAATTACCTTCATTTGAGTTCAGTTCGAAGAGTTTGAATGGGACACCAGATGTTGGAAGTAGTGTACAAGATCAAAATGTCTTAAAGCAATCACATCGTTCAGCCTTCTCAAGGTACAACTCATCATCTCATCAAGGTCCAACAGGAAATGTTGGTAGTTGTTCACCTATTGATAATATCTCAGAGGCTGCAAAAGTAGAATCGGTGCAAGGAATAAGAACTTATTTTAATAGCATGCCTCCCAATAATCTTCAGTCCAATGGAAGTAATAACAACTACGAACTTGGTTCCAGTACAGATAATAATGACTTCACCAAATCTTCTGCAGCCATTGATAAGCTAACACAGCAGAAAGCAACCACCAAATATCTACAACCCTCTTCAGCTTCCCAACCTGTTGAAAATTTGTCTCTAAAGCCTTTAGCTCAAGAAAATGGTGATAAGCAACACATACAAGTGCAACACCACCACCACCACCACCACCACCATCACCATCACATGCATAACATGGTTGCTCATCAATTAGTCAATCGAAATGGCCAATCTCTTCAAATGAAGACAGCTACGTCTCTTAATGAATCTTCAACTAATCCTTTGAGTGCACCAATTAAAGGAAATGCTGTAGGTAATCTGAGTCTGAATGGGAGTGCCTCAGAGAGTCACCATGGGAGCAATGTTGATCCAGGGAACAATATTAATAATAATCCCACTTTACTTGTTGGCAAAGAAGTAGCTGGAAACATGGAACTTGATCATAGAATATCTGAAAAGGAGGGAACAACTAGTTTGATGAGACATGAGGATCCAAATTTGACTATCCAAAATCAATTTGCACTAAGGGAAGCTGCTTTGAACAAGTTTCGCCAAAAGAGGAAAGAGAGATGCTTTGAGAAAAGGGTTCTCTATCAAAGTAGGAAGAAACTAGCAGAACAAAGGCCTCGAGTCCGTGGACAATTTGTACGACAAGCAGCTGAGGAAAATAAAGAAAAATAA 2379 0.3888 MGLVQINNVEDFVNINPKRPAELNQHMQDEQNKVIRGGITGEGQDLSMEDESRIYDNIIIGDYQNNHESHHINNQGDHHNNVVKKSTKQQIQGPLVRWERFLPVRSLRVLLVENDDSTRHVVCALLRNCGYEVEAVEDGQQAWKILEDLSANIDLVLTEVALPSLTGIGLLSKIMSHKTRKNIPVIMMSSHDSMNIVFKCLSRGATDFLVKPLRKNELKNLWQHVWRKCHSSSGSGSESGVRAQKSLKSESGEHSDNKHGNCDEDDIGSIGLNARDKSDNGSGTQVINLQSSWTKMAVEVNSPRPMSLWEQLGDPPVGSTCAQVIHPTPKTNANDKVVTTKDCETQDELNMMTGIDLEITPSRSIRTLEPCGQREEVPSKFVASNINKSYEKEKVDEKEEKGQEEQNSNERLVGESKNQATDPTSAFNNINSNSDPILEIQCLENPNGMVSNVEDNNIYGNKELPSFEFSSKSLNGTPDVGSSVQDQNVLKQSHRSAFSRYNSSSHQGPTGNVGSCSPIDNISEAAKVESVQGIRTYFNSMPPNNLQSNGSNNNYELGSSTDNNDFTKSSAAIDKLTQQKATTKYLQPSSASQPVENLSLKPLAQENGDKQHIQVQHHHHHHHHHHHHMHNMVAHQLVNRNGQSLQMKTATSLNESSTNPLSAPIKGNAVGNLSLNGSASESHHGSNVDPGNNINNNPTLLVGKEVAGNMELDHRISEKEGTTSLMRHEDPNLTIQNQFALREAALNKFRQKRKERCFEKRVLYQSRKKLAEQRPRVRGQFVRQAAEENKEK 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2733 792 Gene3D - 106 260 - -
Alju02g2733 792 MobiDBLite consensus disorder prediction 230 246 - -
Alju02g2733 792 SUPERFAMILY CheY-like 105 230 IPR011006 -
Alju02g2733 792 PANTHER TWO-COMPONENT RESPONSE REGULATOR 107 428 IPR045279 GO:0009736
Alju02g2733 792 MobiDBLite consensus disorder prediction 770 792 - -
Alju02g2733 792 Coils Coil 387 407 - -
Alju02g2733 792 MobiDBLite consensus disorder prediction 391 432 - -
Alju02g2733 792 ProSiteProfiles Response regulatory domain profile. 108 226 IPR001789 GO:0000160
Alju02g2733 792 CDD psREC_PRR 109 212 - -
Alju02g2733 792 MobiDBLite consensus disorder prediction 247 272 - -
Alju02g2733 792 SMART REC_2 107 222 IPR001789 GO:0000160
Alju02g2733 792 MobiDBLite consensus disorder prediction 539 563 - -
Alju02g2733 792 MobiDBLite consensus disorder prediction 477 518 - -
Alju02g2733 792 MobiDBLite consensus disorder prediction 391 411 - -
Alju02g2733 792 FunFam Two-component response regulator-like PRR37 107 265 - -
Alju02g2733 792 MobiDBLite consensus disorder prediction 230 285 - -
Alju02g2733 792 ProSiteProfiles CCT domain profile. 742 784 IPR010402 GO:0005515
Alju02g2733 792 Pfam CCT motif 742 784 IPR010402 GO:0005515
Alju02g2733 792 Pfam Response regulator receiver domain 109 220 IPR001789 GO:0000160
Alju02g2733 792 MobiDBLite consensus disorder prediction 412 432 - -
Alju02g2733 792 MobiDBLite consensus disorder prediction 649 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2733 Alju-ChrAlju02 34546221 34562331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2733 183 786 Response Regulator Gene Family AT5G02810 40.320 1.51e-82 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Alju02g2733 Response_reg 5.3e-22 CL0304