Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2712 ATGCTGTTGCGGCTTTGCACTCCAACCTTCTGGTGGTCTCTACGTTCTCTTTCCAACGCCCACCGGTATCCTCACCCTTCCTCCTCCTTCCACCTTAACCTTTCTTCTTCAATCCAACCTCAGGTTTCTGGCATATTGGACGGTGATTGCGATGGTTTCTTGCCATGGTTGGAGCGGAAAGCTGGCTCTAGGATTTCATCAGCACTTTCAATTGGGAAGTCTCCGTATGGCAGGGCTCTTTTTGCCTCTAGGATTATACACACGGGAGAATGCATTTTACAGGTTCCTTATTCTGTGCAAATAAGTGTGGATAATTTACTCCCAGAAATCAGATCTTTGATCAGCAATGGAGTTGGAAATATTTCAAAACTTGCTGTTGTTATTCTAGTTGAGCAGAAACTTGGTCGGGACTCTGAGTGGGACCCATATATCAGCATTCTTCCTCAGCAAGGACAACTTCATAATACAATATTTTGGAGTGAAAGTGAATTGGATATGATCCGGATAAGCTCAGTGTGTCAGGAAACTATCAATCAAAAGTCTCAAATTGAGAAGGACTTTTTGGCAATGAGACCAGTTTTTGAAAGCCTCCTCAAAAGTTTTGGAGAATTTACTTCCAGGGATTTCATGCATGCATGCACACTCGTTGGTTCTCGGGCATGGGGAAGCATGAAGGGCTTATCTCTGATTCCTTTTGCAGATTTCTTGAATCATGATGGAGTTTCAGAAGCAATTGTAATGAGCGATGATGACAAACAATACTCAGAAGTTGTTACCGCTGATCGTGACTATGCTCTTGGTGAACAGGTATTAATAAGATATGGAAAATTTTCTAATGCTACCTTGATACTGGACTTTGGCTTTACACTTCCATACAACAATTACGATGAGGTCCATATCCAGCTTGATATACCTAAGCATGATCCTCTGCATGACCCGAAGATGGAACTCTTGAGGCAATATTTTGTGCGCCTCACCAAAGACGTGAAAGGATTGAGTAACTCTGTTAATTCTTTCATAATCAAGGAAGTGACATCTGCCAGAGGAAAAGGAAAGGGACTTCCGCAATCTCTTCGTGCATTTGCTCGCGTCCTGTCTTGCACCTCTCCTCAAGAACTAAACGATTTGACCATGGAGGCTGCACAAACTGATGGTAGACTTGCTAGGTGCCCATTGCGCAATATCAACAAAGAGATTGAAGCACATTTGATGTTGTCTTCATTATTCGCCAAATTAATTTCTGAGCACTCTGAAGCCATTCTGTCCTTGGAATCTTACAACGTTCCCTCCCTCTCTACAAAACTTGCTGTTAGAAGAACAATGGCTCGGGATCTGTTAGTTGGTGATCTTCGCATTCTCAAATCTGCTTCCGCTTGGCTTGACAATTACTGTTCTTCTTTGACTGGACGATGTATTCATTGCTAG 1425 0.4274 MLLRLCTPTFWWSLRSLSNAHRYPHPSSSFHLNLSSSIQPQVSGILDGDCDGFLPWLERKAGSRISSALSIGKSPYGRALFASRIIHTGECILQVPYSVQISVDNLLPEIRSLISNGVGNISKLAVVILVEQKLGRDSEWDPYISILPQQGQLHNTIFWSESELDMIRISSVCQETINQKSQIEKDFLAMRPVFESLLKSFGEFTSRDFMHACTLVGSRAWGSMKGLSLIPFADFLNHDGVSEAIVMSDDDKQYSEVVTADRDYALGEQVLIRYGKFSNATLILDFGFTLPYNNYDEVHIQLDIPKHDPLHDPKMELLRQYFVRLTKDVKGLSNSVNSFIIKEVTSARGKGKGLPQSLRAFARVLSCTSPQELNDLTMEAAQTDGRLARCPLRNINKEIEAHLMLSSLFAKLISEHSEAILSLESYNVPSLSTKLAVRRTMARDLLVGDLRILKSASAWLDNYCSSLTGRCIHC 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2712 474 SUPERFAMILY SET domain 50 294 IPR046341 -
Alju02g2712 474 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 46 288 - -
Alju02g2712 474 Gene3D set domain protein methyltransferase, domain 1 47 288 - -
Alju02g2712 474 Pfam SET domain 77 275 IPR001214 GO:0005515
Alju02g2712 474 Pfam Rubisco LSMT substrate-binding 306 453 IPR015353 -
Alju02g2712 474 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 50 418 - -
Alju02g2712 474 Gene3D - 291 465 IPR036464 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2712 124 268 NAC Transcription Factor Family AT3G56570 26.490 3.83e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju02g2712 SET 7.3e-09 No_clan