Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2704 ATGTTTGGACTTTTGTGTAGCAACCAAAGCGATTTATCTCCCTTGTCATTCCATTTGTCTTTCACCTTGAATCTCCATCCATATTCAACCCATGCACAAAAGAAGAAGAAGAAAAAGAAGCAGGTGATAATAAAGCGGAAGAGGTGTCAGCAAGCCCTTGTGGATCAGGGAGGGCATGTAGACAAAGAGGAATGGAGGACAGTGACCATCTCTAAAGAGGAAGAGAACAAAGGTGGCGGCGAGGAAGAAAGTGGGAGGAGTGGCAAGAAGAAGCTTAAGGTTGATGTCTGGTTCGGGTCTTGGAAGACCTCGGCAGCCATCAGAACCGCTCTCAGTCATGTTGGAAATCTCATTACGGGCGTTACCAAGGGCTACCGTTATAAGATGAGTGTTCTTAATCCTGGCTATGTAAATGTTGCACTTTATATCAGTGCAGTAGCCCTGAGGAAAATTGCAGTTTCTATATTATTCTCTAGTGGTCAGTTTCATGATTTGTGTTATTGGGCTGTGAGGAAAGTGGACATACTTGAGGGGGTCTCTATTGTTCGATCTGAAAAGGTCAAGGACGAGCTTGTATTGGATGGGAATGATGTGGAGCTGGTCTCTCGCTCTGCAGCTCTCATTAATCAGAAGTGCCACGTCAAAAATAAGGATATCCACAAGTTTCTTGATGGCATCTATGTGAGTGAGAAAGGCACTATCCTACAAGAAGATTAG 717 0.4421 MFGLLCSNQSDLSPLSFHLSFTLNLHPYSTHAQKKKKKKKQVIIKRKRCQQALVDQGGHVDKEEWRTVTISKEEENKGGGEEESGRSGKKKLKVDVWFGSWKTSAAIRTALSHVGNLITGVTKGYRYKMSVLNPGYVNVALYISAVALRKIAVSILFSSGQFHDLCYWAVRKVDILEGVSIVRSEKVKDELVLDGNDVELVSRSAALINQKCHVKNKDIHKFLDGIYVSEKGTILQED 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2704 238 SUPERFAMILY Ribosomal protein L6 88 124 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Alju02g2704 238 Gene3D - 125 238 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Alju02g2704 238 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 83 237 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Alju02g2704 238 Gene3D - 19 124 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Alju02g2704 238 SUPERFAMILY Ribosomal protein L6 169 231 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2704 Alju-ChrAlju02 33627554 33632256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2704 87 238 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 58.710 4.12e-54 171