Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2702 ATGCCATCAGTTCAAGAAGCCTCTGAAGATTACTTCAACATCAACTTTATAGTTCATTCTCTTGTCATTTCGCGTGAGACAGGAGTTCCTGAATCAATGTCTTTTCTCGTGTTTGAACCTCCTTTCTTCATACCTTGTGAAGAATTGCTTCAAGACATTTCAGGATTTCTTCGTAGAAATCTATCCAATTATGTCCGTGAGCATGACTTTCAACAACTGGCATCTGAAATCATATCTTATACTCATTATGCAATTCAAAATACTACCTCTGAAACCGAAACTACAGAAGCTCGCATAATACCATTGTTCTTGGATTTACCGTTAATCACTCTGGATGGATCAGAAACTCAAAATTTGATCGAGATTGGTGGTGATGATTCTAATCTGTTGACAGAAATCATGGAGCAATCAATGCAACAGTTGAATATGATTCCAACATCAAAGGAGGCTATAGCATCACTCAAGAAATTGGAAACTTTAAATGATGAAATGAAGGCAAACACGTGTAGTATATGCATGGAAGGTTTTGAAGAAGATTTTGGAGATGTTTCTGCAATGCCATGCGACCATTTTTATCACCATAATTGTATTGTAACATGGCTGGAAACAAATCATACATGTCCACTGTGTCGCTTTCAAATGCCTACAGAATAA 654 0.3685 MPSVQEASEDYFNINFIVHSLVISRETGVPESMSFLVFEPPFFIPCEELLQDISGFLRRNLSNYVREHDFQQLASEIISYTHYAIQNTTSETETTEARIIPLFLDLPLITLDGSETQNLIEIGGDDSNLLTEIMEQSMQQLNMIPTSKEAIASLKKLETLNDEMKANTCSICMEGFEEDFGDVSAMPCDHFYHHNCIVTWLETNHTCPLCRFQMPTE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2702 217 ProSiteProfiles Zinc finger RING-type profile. 169 211 IPR001841 -
Alju02g2702 217 Coils Coil 147 167 - -
Alju02g2702 217 CDD RING-H2_PA-TM-RING 168 211 - -
Alju02g2702 217 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 76 215 - -
Alju02g2702 217 SMART ring_2 169 210 IPR001841 -
Alju02g2702 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 216 IPR013083 -
Alju02g2702 217 SMART ringv_2 168 211 IPR011016 GO:0008270
Alju02g2702 217 SUPERFAMILY RING/U-box 158 215 - -
Alju02g2702 217 Pfam Ring finger domain 167 211 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2702 Alju-ChrAlju02 33475674 33476327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2702 130 217 C3H Transcription Factor Family AT1G18760 36.264 2.04e-14 67.8