Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2679 ATGAATGGTTCATTTGGAGGGGTGGGGGGCAGCGCCGCCGCGGAAGCTGAGAAGAACACAGCTATGGCGAGAATCAAGGTTCATGAACTGAGGCAGAAGACGAAGGCCGAGCTGCTCAACCAGCTCAAGGATCTCAAAGCTGAGCTTGCTTTGCTCAGAGTTGCTAAAGTCACAGGCGGTGCACCGAACAAACTTTCCAAGATTAAGGTGGTAAGGTTGTCCATAGCTCAGGTGTTGACAGTTATATCTCAGAAGCAGAAGGCTGCGTTGAGGGAGGTATACAAGAATAAGAAGCATTTGCCTCTTGATCTGCGTCCTAAGAAGACTAGGGCTATCCGTAGAAGGCTTACTAAGCACCAGGCATCACTGAAGACTGAAAGACAAAAGAAAAAGGATACATATTTTCCTTTGAGGAAATATGCCATTAAGGTGTAG 435 0.4736 MNGSFGGVGGSAAAEAEKNTAMARIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKHLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKDTYFPLRKYAIKV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2679 144 Hamap 50S ribosomal protein L29 [rpmC]. 25 85 IPR001854 GO:0003735|GO:0005840|GO:0006412
Alju02g2679 144 FunFam 60S ribosomal protein L35 22 98 - -
Alju02g2679 144 Pfam Ribosomal L29 protein 29 85 IPR001854 GO:0003735|GO:0005840|GO:0006412
Alju02g2679 144 CDD Ribosomal_L29_HIP 29 85 - -
Alju02g2679 144 Coils Coil 13 55 - -
Alju02g2679 144 FunFam 60S ribosomal protein L35 99 144 - -
Alju02g2679 144 NCBIfam 50S ribosomal protein L29 29 85 IPR001854 GO:0003735|GO:0005840|GO:0006412
Alju02g2679 144 SUPERFAMILY Ribosomal protein L29 (L29p) 25 86 IPR036049 GO:0003735|GO:0005840|GO:0006412
Alju02g2679 144 Gene3D - 22 98 IPR036049 GO:0003735|GO:0005840|GO:0006412
Alju02g2679 144 PANTHER 60S RIBOSOMAL PROTEIN L35 22 144 IPR045059 GO:0000463|GO:0022625
Alju02g2679 144 Gene3D - 99 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2679 Alju-ChrAlju02 32563744 32566103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2679 22 144 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 87.805 2.20e-72 211