Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2650 ATGATGATATCGAGGGGACTGTTCGGATGGTCCCCACCCCATATACAGCCGCTCACGCCGGTGTCGGAGGTATCTGAGCCGCCAGAGTCACCGTCGCCTTATTTAGACCCCGGAGCTGAGACCTCTGCGTCCCACCAGGTTGAAGTGGAGGAGGAGATCGAGGAGCCCGAGGAGATTGAGCCACCGCCCGCCGCAGTGCCCTTCTCCAGGCTCTTTGCTTGCGCGGACCGGCTTGATTGGACTCTGATGGTCGTTGGCTCCCTGGCAGCAGCTGCTCATGGTACAGCCCTCGTAGTCTACTTACACTACTTTGCGAAGATCATTAATGTCTTGAGGATGGATCCTTCGCAAGGTCCGTCCGAGGAGCAATTCAACAAGTTCAAGGAGCTTGCTTTAACCATAGTTTATATCGCTGCGGGTGTTTTTGCTGCTGGTTGGATAGAGGTTTCATGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTTATCAGATCAAAATATGTTCAAGTATTGCTTAACCAAGATATGAGTTTTTTTGATACATATGGGAATAATGGAGATATTGTGAGCCAAGTATTAAGTGATGTGCTGCTCATTCAGTCTGCTCTTAGTGAAAAAGTTGGAAATTATATCCACAATATGGCTACGTTCTTCAGTGGACTTGTTATTGGATTTATCAACTGTTGGCAGATTGCATTGATAACATTAGCCACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTCCATAGGCTGGCAGAGAATATTCAAGACGCATATGCTGAAGCTGCTAGCATTGCTGAACAGGCGGTTTCTTATATCAGGACATTGTATGCATTTACAAATGAAACATTGGCCAAGTATTCATATGCTACTTCACTTCAAGCTACTCTTAGATATGGTATCTTAATAAGTCTTGTTCAAGGGCTTGGGCTTGGATTTACGTATGGGCTTGCGATATGCTCGTGTGCATTGCAACTCTGGGTAGGAAGGTTCTTGGTTATGCATGACAAAGCTCATGGTGGTGAAATCATAACAGCTCTCTTTGCTGTAATTTTAAGTGGCCTGGGTTTGAATCAGGCTGCAACAAACTTCTACTCATTTGATCAAGGACGTATAGCTGCTTATAGATTGTATGAGATGATAAGCAGGTCATCCTCATCTGTTAATCATGATGGAACTGCCCCAGATTCAGTGCAAGGGAATATAGAGTTTAGGAATGTTTATTTTAGCTATCTATCTCGTCCTGAAATCCCTATATTAAGTGGGTTTTATCTGACTGTTCCTGCTAAGAAAGCTGTGGCACTTGTTGGTAGAAATGGATCTGGAAAAAGTAGTATAATTCCACTCATGGAGCGGTTCTATGATCCCACATTAGGGGAGGTTCTTTTAGATGGTGAGAACATTAAGAGTCTGAAACTGGAATGGCTAAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTTAGCTTGAGTATAAGAGATAACATTGCTTATGGTCGGGATGCCACTATGGATCAAATTGAAGAGGCTGCCAAGATAGCCCATGCACATACATTCATCAGCTCATTAGGGAAAGGTTATGATACACAGGTTGGAAGGGCTGGCTTAGCCTTGACAGAAGAACAGAAGATAAAGCTATCTATTGCCAGAGCTGTGCTTTTAAATCCATCCATTCTTCTGCTTGATGAGGTAACTGGTGGACTTGACTTTGAGGCTGAAAGGGCTGTTCAGGAGGCTTTGGATCTTCTAATGTTGGGGCGTTCAACAATAATAATTGCTCGAAGGCTTAGCCTTATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAGTTATTGACCTTGGATGGCTTATATGCAGAGCTCCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAGACTACAAGGAGATTGCAGCTTTCCAAATCGAGAAGGATTCACCCTCAAGTCATAGCTTTAAAGAACCATCATCCCCAAAAATGATGAAGTCACCTTCCCTTCAGAGAATTTCTAACGTATTTCGGCCTTCAGATGGTATCTATAGCTCACAGGAATCACCAAATGTTCGGAGCCCACCGCCAGAAAAGATGCATCAAAATGGTCAGTCTATGGATGCAACTGATAAGGAGCCTTCAATAAGAAGGCAAGACAGTTTTGAAATGAGGCTCCCAGAGTTACCCAAAATTGATGTTCAGTCTGTGCATCGACAAAAATCTAATGGTTCTGATCCTGAATCCCCTGTTTCACCTCTGTTAACATCTGATCCCAAGAATGAACGCTCCCATTCACAGACTTTTAGTAGACCCCATAGTGATTCTGATGATATTTCATTGAAACTGAGAGAAGCAAAAGATACCAAGCATCGAAAACCTCCATCATTTTGGAGACTTGCTAGACTTAGTTTTGCAGAGTGGCTTTATGCTTTGTTAGGAAGCATAGGTGCTGCCATCTTTGGCTCTTTCAATCCTCTTCTTGCTTATGTTATTGGCCTGGTGGTGACTGCTTACTATAGACTTGGTCAATCTCATCACCTCCGGCAGGAGGTAGATAAGTGGTGCTTAATTATTGCTTGCATGGGCATTGTGACAGTTGTTGCCAACTTCTTACAACATTTCTACTTTGGTATTATGGGGGAGAAAATGACAGAAAGAGTTAGAAGAATGATGTTCTCAGCCATGCTACGCAATGAAGTTGGTTGGTTTGATGAAGAGGAAAACAGTGCTGACAATTTATCCATGCGTCTGGCCAATGATGCTACATTTGTACGAGCTGCTTTTAGCAATCGTCTTTCCATATTTATACAGGACAGCGCTGCAGTTATTGTTGCTGTTCTTATCGGTGCATTGCTGCACTGGCGATTAGCACTTGTGGCATTAGCAACACTTCCCATCCTCTGTGTTTCTGCAATTGCCCAGAAATTGTGGCTTGCTGGATTTTCTAGGGGTATACAGGAAATGCACCGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGGAATATTTACACTGTTGTAGCATTTTGTGCGGGCAATAAGGTAATGGAGCTCTATAGACTGCAGCTGAAGAAAATATTTAAGCAGAGCTTTTTGCATGGGGTGGCCATTGGTTTTGCATTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTTTGCTTTGGTACACTGCCATATGCATAAGAAACAGTTATATGGATCCACCTACTGCGCTCAAGGAGTATATGGTTTTCTCATTTGCAACATTTGCGCTGGTGGAGCCTTTTGGTTTGGCTCCTTACATACTTAAACGGCGTAAATCCCTCATTTCAGTGTTTGAAATTATAGACCGTGTACCTAAAATTGACCCTGATGATAACACAGCATTGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATATTGATTTTTGTTATCCTTCTCGTCCTGAAGTTTTGGTATTGAGTAATTTCAGTCTCAAAGTTAATGGGGGACAAACAGTTGCCATTGTTGGAGTTTCAGGGTCAGGAAAGAGCACTATAATATCTTTGATTGAGAGATTTTATGATCCAGTTGCTGGTCAAGTTTTGCTAGATGGGAGGGATTTAAAACTATATAATATGAGGTGGTTGAGGAGCCACCTCGGTTTAGTTCAGCAGGAACCTATTATTTTCTCGACTACCATAAGGGAAAATATCATATATGCAAGGCATAATGCCAGTGAAGCTGAGATGAAGGAGGCAGCGAGAATAGCAAATGCTCACCATTTCATAAGCAGCTTGCCCCATGGTTATGATACTCATGTTGGAATGAGAGGGGTTGACTTGACGCCTGGACAGAAACAGAGAATTGCGATAGCAAGGGTAGTGCTGAAGAATGCACCTATTTTGTTGTTGGATGAAGCTAGTTCATCAATCGAATCGGAGTCAAGCCGAGTGGTGCAAGAAGCTCTGGACACTCTTATAATGGGAAACAAGACCACCATCCTAATAGCACATAGGGCTGCAATGATGAGGCACGTTGATAACATTGTAGTGCTCAATGGAGGACGAATAGTAGAAGAAGGAACCCATGATTCATTGGTGGCAAAAAATGGCCTGTATGTCCGATTGATGCAGCCTCACTTTGGAAAGGCATTGCGTCAACATCGACTTATTTAG 4212 0.4304 MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAETSASHQVEVEEEIEEPEEIEPPPAAVPFSRLFACADRLDWTLMVVGSLAAAAHGTALVVYLHYFAKIINVLRMDPSQGPSEEQFNKFKELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVMHDKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSSVNHDGTAPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKSLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLGKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRDYKEIAAFQIEKDSPSSHSFKEPSSPKMMKSPSLQRISNVFRPSDGIYSSQESPNVRSPPPEKMHQNGQSMDATDKEPSIRRQDSFEMRLPELPKIDVQSVHRQKSNGSDPESPVSPLLTSDPKNERSHSQTFSRPHSDSDDISLKLREAKDTKHRKPPSFWRLARLSFAEWLYALLGSIGAAIFGSFNPLLAYVIGLVVTAYYRLGQSHHLRQEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVLIGALLHWRLALVALATLPILCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGVAIGFAFGFSQFLLFACNALLLWYTAICIRNSYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNTALKPPNVYGSIELKNIDFCYPSRPEVLVLSNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNMRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVRLMQPHFGKALRQHRLI 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2650 1403 Pfam ABC transporter 1172 1320 IPR003439 GO:0005524
Alju02g2650 1403 SMART AAA_5 434 814 IPR003593 GO:0016887
Alju02g2650 1403 SMART AAA_5 1181 1368 IPR003593 GO:0016887
Alju02g2650 1403 FunFam ABC transporter B family member 20 397 644 - -
Alju02g2650 1403 CDD ABC_6TM_Pgp_ABCB1_D2_like 820 1137 - -
Alju02g2650 1403 MobiDBLite consensus disorder prediction 755 782 - -
Alju02g2650 1403 PANTHER ABC TRANSPORTER B FAMILY 48 644 IPR039421 -
Alju02g2650 1403 MobiDBLite consensus disorder prediction 746 799 - -
Alju02g2650 1403 FunFam ABC transporter B family member 6 1001 1151 - -
Alju02g2650 1403 FunFam ABC transporter B family member 20 70 409 - -
Alju02g2650 1403 FunFam ABC transporter B family member 6 771 999 - -
Alju02g2650 1403 Pfam ABC transporter 428 572 IPR003439 GO:0005524
Alju02g2650 1403 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 407 642 IPR003439 GO:0005524
Alju02g2650 1403 Coils Coil 253 273 - -
Alju02g2650 1403 Gene3D ABC transporter type 1, transmembrane domain 70 652 IPR036640 GO:0005524|GO:0016020
Alju02g2650 1403 MobiDBLite consensus disorder prediction 18 62 - -
Alju02g2650 1403 Gene3D ABC transporter type 1, transmembrane domain 770 1003 IPR036640 GO:0005524|GO:0016020
Alju02g2650 1403 Gene3D ABC transporter type 1, transmembrane domain 1008 1151 IPR036640 GO:0005524|GO:0016020
Alju02g2650 1403 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 374 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju02g2650 1403 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 831 1123 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju02g2650 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1143 1390 IPR027417 -
Alju02g2650 1403 Pfam ABC transporter transmembrane region 85 357 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju02g2650 1403 Pfam ABC transporter transmembrane region 835 1099 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju02g2650 1403 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 382 - -
Alju02g2650 1403 Gene3D - 397 644 IPR027417 -
Alju02g2650 1403 FunFam ABC transporter B family member 20 1144 1393 - -
Alju02g2650 1403 MobiDBLite consensus disorder prediction 783 799 - -
Alju02g2650 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 641 IPR027417 -
Alju02g2650 1403 MobiDBLite consensus disorder prediction 674 729 - -
Alju02g2650 1403 SUPERFAMILY ABC transporter transmembrane region 814 1139 IPR036640 GO:0005524|GO:0016020
Alju02g2650 1403 MobiDBLite consensus disorder prediction 668 734 - -
Alju02g2650 1403 Gene3D - 1152 1391 IPR027417 -
Alju02g2650 1403 SUPERFAMILY ABC transporter transmembrane region 69 382 IPR036640 GO:0005524|GO:0016020
Alju02g2650 1403 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1154 1391 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2650 Alju-ChrAlju02 31655797 31667137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2650 53 713 Calmodulin-binding Proteins AT2G36910 44.000 1.82e-169 540