Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2648 ATGGCGATCTATAGAATAGCTGTAGGGTCTCCGCGAGAAGCAAGTCAACCTGAGGCCATTAGAGCAGCCGTGGCTGAGTTCTTCTCTATGCTCATCTTCGTTTTCGCTGGCCAAGGTTCTGGCATGGCTTACGGCAAGCTGACGAAGGATGGATCTGCAACACCGGAAGGTTTGATAATGGCGGCATTAGCTCACGCGTTCGGATTATTTGTGGCAGTTTCAGTGGGAGCAAACATATCAGGAGGTCATGTGAATCCTGCGGTCACATTTGGTGCTTTCTTAGGAGGAAGCATAACTTTCTTGAGAAGCATCTTATATTGGTTCGCTCAGTTGCTTGGTTCTGTTGTTGCTTGCATGCTTCTCAAGTTTGCCACTGGTGGATTGGAAACATCAGCATTTGCTCTATCCTCTGGAGTGACAGTGTGGAATGCTTTAGTGATGGAGATAGTGATGACATTCGGGTTAGTATATACGGTGTACGCCACTGCAGTGGATCCAAAGAAAGGCAACGTGGGGGTGCTTGCCCCTGTTGCCATCGGTCTCATAGTGGGAGCCAACATCTTGGTGGGCGGCGCCTTCGACGGAGCCTCCATGAACCCGGCCGTGAGTTTCGGCCACGCCCTGGTTACCTGGTCATGGACCCACCACTGGCTCTACTGGCTCGGCCCCTTTACTGGTGCAGCCATTGCTGCCCTTGTTTATGATATGATCTTCATTGCCAATGATGGTCACCAACAACTTCCTGTTAGGGACGACTTCTAG 762 0.5092 MAIYRIAVGSPREASQPEAIRAAVAEFFSMLIFVFAGQGSGMAYGKLTKDGSATPEGLIMAALAHAFGLFVAVSVGANISGGHVNPAVTFGAFLGGSITFLRSILYWFAQLLGSVVACMLLKFATGGLETSAFALSSGVTVWNALVMEIVMTFGLVYTVYATAVDPKKGNVGVLAPVAIGLIVGANILVGGAFDGASMNPAVSFGHALVTWSWTHHWLYWLGPFTGAAIAALVYDMIFIANDGHQQLPVRDDF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2648 253 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Alju02g2648 253 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g2648 253 SUPERFAMILY Aquaporin-like 14 242 IPR023271 -
Alju02g2648 253 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Alju02g2648 253 PANTHER AQUAPORIN-8 6 247 IPR034294 -
Alju02g2648 253 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g2648 253 FunFam Probable aquaporin TIP1-1 4 252 - -
Alju02g2648 253 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g2648 253 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g2648 253 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g2648 253 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g2648 253 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g2648 253 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2648 Alju-ChrAlju02 31644340 31647637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2648 1 251 Major Intrinsic Protein MIP AT4G01470 77.689 1.45e-143 400
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g2648 02 31644340 31647637 Alju10g0203 10 1490590 1491552 CCT