Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2642 ATGAAGAGGGAAAGAGATCAAGTTCTTGACTGCATCTCCATGGCCAACTGTTTGATGTTTCTTTCTCGTGGCGGAGGCCAATTTGATCGGCCGGTGATCGCAGCCGCCTCCCATGCCGGTGTTGATGGCCATGATGATCGTGTGTTCGAGTGCAAGACTTGTAACCGACAGTTCCCATCGTTTCAAGCATTGGGCGGCCATCGGGCTAGCCATAAGAAGCCAAGGCTGGCCACCGCCGCTTCCGGTGAGATGGACACGCTTAATCATCATGAAGCAAAGCCTAAAACTCACGAGTGTTCTATTTGTGGGATGGAATTTGCAAGAGGGCAAGCTTTGGGTGGTCACATGAGAAAGCACAGAGCTGCTGCAACTTCGAATAATAATAGTAATAGTGCCTATCATCACAACAAAACGACGACGTTGAGTAACAATAGTGACGAAGGTAGTTGTCTTGATTCTGATCACCAGGTTAATAGTTCTTCTGGCGAAAATAGGAAGAAAGTTTTGCTTTTGGATCTGAATTTGACACCTTCCGAGAATGATTCGGAGTTTATCAATTTCACTTGA 567 0.4656 MKRERDQVLDCISMANCLMFLSRGGGQFDRPVIAAASHAGVDGHDDRVFECKTCNRQFPSFQALGGHRASHKKPRLATAASGEMDTLNHHEAKPKTHECSICGMEFARGQALGGHMRKHRAAATSNNNSNSAYHHNKTTTLSNNSDEGSCLDSDHQVNSSSGENRKKVLLLDLNLTPSENDSEFINFT 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2642 188 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Alju02g2642 188 Gene3D Classic Zinc Finger 47 119 - -
Alju02g2642 188 MobiDBLite consensus disorder prediction 117 162 - -
Alju02g2642 188 PANTHER ZINC FINGER PROTEIN ZAT5 8 181 - -
Alju02g2642 188 Pfam C2H2-type zinc finger 97 121 - -
Alju02g2642 188 Pfam C2H2-type zinc finger 48 74 - -
Alju02g2642 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Alju02g2642 188 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Alju02g2642 188 MobiDBLite consensus disorder prediction 121 162 - -
Alju02g2642 188 SUPERFAMILY beta-beta-alpha zinc fingers 47 119 IPR036236 -
Alju02g2642 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
Alju02g2642 188 SMART c2h2final6 97 119 IPR013087 -
Alju02g2642 188 SMART c2h2final6 49 71 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2642 Alju-ChrAlju02 31507827 31508393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2642 1 185 C2H2 Transcription Factor Family AT2G37430 39.894 1.19e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju02g2642 zf-C2H2_6 3.5e-10 CL0361