Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2613 ATGGGTGATACATCACAGCAGAAACTGGCCATTGGAATCGATCTTGGGACCACATACTCATGTGTTGCAGTGTGGCAGCATGATCGAGTAGATATTATTGTGAACGACCAAGGAAATAGAACAACGCCGTCTTATGTTGCCTTCACTGATACTCAAAGGATGGTTGGTGATGGCGCCAAGAACCAGGCTGCTCTTAATCCTACTAACACTGTGTTTGATGCGAAGAGGTTAATTGGTCGGAGGTTTAGTGATTCTCATGTTCAAAGTGATATACAGCTTTGGCCATTTAAGATCATTGGTGGTGATGATGATAAGCCCAAGATTGTTGTGAAATTTAAATCTGAGGAAAGACAGTTTCTACCAGAAGAAATCTCATCCATGGTATTAGCGAAGATGCATGAGATTGCTGAGACATATCTTGGTTCAACAGTTAAGGATGCAGTTGTCACTGTGCCTGCTTATTTCAATGACTCTCAACGCCAAGCAACCAAAAATGCAGCCGCAATTGCTGGCCTTAATGTATTGCGAATAATTAACGAGCCCACTGCTGCAGCAATTGCATATGGTCTTGACAAAAAAGGCAGCTATAACCAAGAGAGAAACATTTTTGTATTTGATCTGGGCGGTGGTACCTTTGATGTGTCTGTTGTCACAATTAATAAGGGTGACTTCAACGTTAAAGCAGTTGACGGTGACACACACCTTGGAGGAGAGGACTTCGACAACAGAATGGTCGACTACTTTGTGAAACAGTTTAAGAGGAAGCAAAAAAAGGATATCACCGGGAATCCAAAGGCCCTTAGGAGGTTGAGAACTGCTTGTGAGAGGGCAAAAAGAACACTCTCATCTTCTTGTACGGTTGATACAACCATTGAGATTGATGCTTTATACGAAGGCATTGATTTTTCTTCAACAATGACTCGCGCTAGGTTTGAGGCATTGAACAAGGACTACTTCACAAAATGTATAGAAATTGCAGAGAAGTGTCTTTTGGATGCCAAGATGGACAAGAGGAGTATTGATGAGGTTGTCCTGGTTGGTGGGTCTGCAAGAATTCCTAAAATCCAACAGCTATTACAGGACTTATTTAATGGGAAGGAGCTATGCAGGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCCATATTAAATGGGCGAGGAAATGAAAATTTACAGGGCATTGTCTTGAGAGATGTCACCCCACTGTCCTTGGGCATCGAGAAGAATGGTGGTCTCATGCAAGTAGTAATTCCAAGGAACACTAGCATTCCTACATCAATGTCAGCAGATATGACCACTGCGTTTGACAACCATACACTAGTCACGTTCGCTGTTTATCAGGGTGAGAGAACAAGGGCTAAGGATAACAACTGGTTGGATACATTTGAGGTAACCATTCCGCCAGAACCAAAGGGTGTGCCTAAGTTCAAAGTTTTATTTTCCATGAATGAGAATGGGATCTTAAAAGTCTCTGCCAGGGAATCTAGAACAGGGAACGAGAATGAGATAACCATAAGTAATAAAGAAAGAAGACTGTCAAAAGAAGAGATTGAAAGGATGGTTCAAGAAGCTGAGAAATACAAGGCTGATGATGTGAGGTACAAGAAGAAAGCTCAAGCAAAGAATGCCTTGGAGGACCATATATACAAAATCAGGACTTGTATAAATAATGGGATGATTGGATCAGGGCTTTCCGCTGCAGTCAGGAAGAAGATTGAGGATGCGATTGAAGGAGCCTCAGAGTTGGTTGATGACCAACAGCTTGCTGAAGTTGACGAGTATGAGCATGAGATGAGCAAGCTTCTGTTTCTCGAGATGTTAGTGGGAGACTATGGCTCCTTGTAA 1863 0.4262 MGDTSQQKLAIGIDLGTTYSCVAVWQHDRVDIIVNDQGNRTTPSYVAFTDTQRMVGDGAKNQAALNPTNTVFDAKRLIGRRFSDSHVQSDIQLWPFKIIGGDDDKPKIVVKFKSEERQFLPEEISSMVLAKMHEIAETYLGSTVKDAVVTVPAYFNDSQRQATKNAAAIAGLNVLRIINEPTAAAIAYGLDKKGSYNQERNIFVFDLGGGTFDVSVVTINKGDFNVKAVDGDTHLGGEDFDNRMVDYFVKQFKRKQKKDITGNPKALRRLRTACERAKRTLSSSCTVDTTIEIDALYEGIDFSSTMTRARFEALNKDYFTKCIEIAEKCLLDAKMDKRSIDEVVLVGGSARIPKIQQLLQDLFNGKELCRSINPDEAVAYGAAVQAAILNGRGNENLQGIVLRDVTPLSLGIEKNGGLMQVVIPRNTSIPTSMSADMTTAFDNHTLVTFAVYQGERTRAKDNNWLDTFEVTIPPEPKGVPKFKVLFSMNENGILKVSARESRTGNENEITISNKERRLSKEEIERMVQEAEKYKADDVRYKKKAQAKNALEDHIYKIRTCINNGMIGSGLSAAVRKKIEDAIEGASELVDDQQLAEVDEYEHEMSKLLFLEMLVGDYGSL 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2613 620 Coils Coil 511 536 - -
Alju02g2613 620 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 546 IPR029047 -
Alju02g2613 620 PANTHER HEAT SHOCK PROTEIN 70KDA 10 582 IPR013126 GO:0005524|GO:0140662
Alju02g2613 620 Gene3D - 193 369 - -
Alju02g2613 620 Pfam Hsp70 protein 10 607 IPR013126 GO:0005524|GO:0140662
Alju02g2613 620 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Alju02g2613 620 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Alju02g2613 620 Gene3D - 547 611 IPR029048 -
Alju02g2613 620 FunFam Heat shock 70 kDa 236 321 - -
Alju02g2613 620 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 545 607 IPR029048 -
Alju02g2613 620 SUPERFAMILY Actin-like ATPase domain 197 390 IPR043129 -
Alju02g2613 620 Gene3D - 11 387 - -
Alju02g2613 620 PRINTS 70kDa heat shock protein signature 372 392 - -
Alju02g2613 620 PRINTS 70kDa heat shock protein signature 399 418 - -
Alju02g2613 620 PRINTS 70kDa heat shock protein signature 9 22 - -
Alju02g2613 620 PRINTS 70kDa heat shock protein signature 147 167 - -
Alju02g2613 620 PRINTS 70kDa heat shock protein signature 210 220 - -
Alju02g2613 620 PRINTS 70kDa heat shock protein signature 340 356 - -
Alju02g2613 620 PRINTS 70kDa heat shock protein signature 479 495 - -
Alju02g2613 620 PRINTS 70kDa heat shock protein signature 37 49 - -
Alju02g2613 620 PRINTS 70kDa heat shock protein signature 59 67 - -
Alju02g2613 620 FunFam Heat shock 70 kDa protein 393 547 - -
Alju02g2613 620 FunFam heat shock 70 kDa protein-like 72 127 - -
Alju02g2613 620 Gene3D - 72 127 - -
Alju02g2613 620 FunFam Heat shock protein 70 11 203 - -
Alju02g2613 620 SUPERFAMILY Actin-like ATPase domain 9 192 IPR043129 -
Alju02g2613 620 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 396 551 IPR029047 -
Alju02g2613 620 Gene3D Actin; Chain A, domain 4 236 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2613 Alju-ChrAlju02 30581339 30583459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2613 10 607 Calmodulin-binding Proteins AT3G12580 69.115 0.0 848