Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2557 ATGGATCCTTCACTCTGCGTTAATGGCTGTGGCTTCTTTGGTTCTTCTGAAACCAAGAACATGTGCTCAAAGTGTTATAAAGATCATATTCTACAGCTCAACAAAAGTATCATTGAATCATTATCTGATGATCTTCAAGATTTGAAGATACGCAATGCCAGGAATATTACTGAATCTGTGATGACGATGGATAATATTGTTGATCAAGCTTCTATTCCTTCCAAAGACGCTTTGGAATCTCAAAAGAAGAAGAGGTGCAAGAGTTGCAACAAAAAAGTCGGCTTAACTGGGTTCATGTGCAAATGCGGAGACTTATTTTGTGGAAAGCATCGATATCCAGAAGAACATTCGTGTGTTGTGGATTTCAAGCAGATCGGTCGTGAACTTCTTCGCAAAAAGAATCCACTTTGTCAAGCTGACAAATTAGATCACAAACTTTAG 441 0.3832 MDPSLCVNGCGFFGSSETKNMCSKCYKDHILQLNKSIIESLSDDLQDLKIRNARNITESVMTMDNIVDQASIPSKDALESQKKKRCKSCNKKVGLTGFMCKCGDLFCGKHRYPEEHSCVVDFKQIGRELLRKKNPLCQADKLDHKL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2557 146 ProSiteProfiles Zinc finger AN1-type profile. 80 126 IPR000058 GO:0008270
Alju02g2557 146 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 36 - -
Alju02g2557 146 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 143 - -
Alju02g2557 146 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Alju02g2557 146 Gene3D - 1 46 - -
Alju02g2557 146 Pfam A20-like zinc finger 4 27 IPR002653 GO:0003677|GO:0008270
Alju02g2557 146 SUPERFAMILY AN1-like Zinc finger 76 140 IPR035896 -
Alju02g2557 146 SMART AN1_Zf_4 86 123 IPR000058 GO:0008270
Alju02g2557 146 Gene3D - 61 141 IPR035896 -
Alju02g2557 146 Pfam AN1-like Zinc finger 86 119 IPR000058 GO:0008270
Alju02g2557 146 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Alju02g2557 146 FunFam Zinc finger AN1-type containing 6 61 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2557 Alju-ChrAlju02 29100565 29101005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2557 5 143 C2H2 Transcription Factor Family AT3G52800 39.610 2.31e-32 111