Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2523 ATGCGGATGAGCTGTAATGGATGTCGTGTTCTCAGAAAAGGTTGCAGTGAAGATTGTATCATCAGACCTTGCTTGCAGTGGATCAAATCGCCGGAATCTCAAGCTAACGCCACCGTGTTCCTCGCTAAGTTCTACGGCCGAGCTGGCCTCTTGAATCTCATCAACGCTGGCCCTCAACACCTTCGTCCTGCTATTTTTCGGTCTCTGCTTTACGAAGCATGCGGGCGGATACTTAACCCGATTTATGGGTCCGTGGGTCTGTTATGGTCCGGGAACTGGCCACGGTGTCAGGCCGCCGTGGAGGCGGTTCTGAAGGGTGATCCGATTACTCCGATCAACTCGGATGCCGCCGAGAGTGGGCAGGGTCCACCGCTGAAGCCTTACGACATACGTCATGTGAACAAGGACAAGAACTCGACCGAGTCGAACGATTCCCAACGAGTAAAGTCCAAGTCACGGTTCAAGCGATCCGCCGGGAAGTCGAAGAAGGTGAACAAGGGGTCCGAGTTGAAAACCGAGTTGAAGTCCGCTGAACTGGAAGAACCGCGCAGGGGATGCACAGTGTGCTGTGCGACCGTTGATGAGCCGGCGAACCGGTCCGTGAGCCACGAGTCGTCGCTGAGCCACCAGTCCGAGGAGGCACCGCCGAAAGTGGCGGTGGCGGAAGGGGATAGTAAAGAGAGCGAGAGCATGGTGTCAGAAGAGACCGCGGAGACTTCGATGCTCTTCCGGGACGAACCGGAATCAACACCCAAACAGAGCGACGGAGCCGATGGGGCGGACCTGGGGCTGGAGCTGACGCTGGGGATCAAACCGGTGACACGTGAGGCTCACGTGATGCCGGTCAAGAAGAGAAAGATAGAATTTCATTTTCAAGACTCAGCTAGCGACTCGGGGGCTAATAAGAAAGCGGCAGCCATGAAGCTGGGGCTCGAATGCTCGGCTTAA 948 0.5622 MRMSCNGCRVLRKGCSEDCIIRPCLQWIKSPESQANATVFLAKFYGRAGLLNLINAGPQHLRPAIFRSLLYEACGRILNPIYGSVGLLWSGNWPRCQAAVEAVLKGDPITPINSDAAESGQGPPLKPYDIRHVNKDKNSTESNDSQRVKSKSRFKRSAGKSKKVNKGSELKTELKSAELEEPRRGCTVCCATVDEPANRSVSHESSLSHQSEEAPPKVAVAEGDSKESESMVSEETAETSMLFRDEPESTPKQSDGADGADLGLELTLGIKPVTREAHVMPVKKRKIEFHFQDSASDSGANKKAAAMKLGLECSA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2523 315 MobiDBLite consensus disorder prediction 129 151 - -
Alju02g2523 315 MobiDBLite consensus disorder prediction 198 212 - -
Alju02g2523 315 MobiDBLite consensus disorder prediction 198 260 - -
Alju02g2523 315 PIRSF AS2 1 308 IPR017414 -
Alju02g2523 315 MobiDBLite consensus disorder prediction 113 169 - -
Alju02g2523 315 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Alju02g2523 315 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 267 - -
Alju02g2523 315 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Alju02g2523 315 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2523 Alju-ChrAlju02 28076422 28077465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2523 1 287 AS2 family AT3G02550 57.143 1.61e-105 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju02g2523 LOB 2.1e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g2523 02 28076422 28077465 Alju02g2523 02 28076422 28077465 ECH