Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2492 ATGCCCTCTTATTCCCCGCTCTCTCTCCCCTCTCTCTGTGAGACTTTCAACTTTAAAGTTTTTACCACTCAGTACGCTTACCACTGGGAATCTGGTCCAGCTCGTGAGTTAATCAATATGATGTTCACTCCAACTAATAATAATTACAGCAACTATTTCTTCCCTTCTTCTTCATCTTCTTTCCCTCTTCTTCATCATCCTTCAGCTTTTGAAAACAATAATGCTTCTTCTTCTTCTTTGTCTTCTGCTGCTGCGAATGTCACTTTTTACCATCACGATCATCTTTCTTCTCTCCCTTTCATACCCTCTCTAATCCCAGAAGCATTAACCAATAGTCTTGCTGTGCCCTCAGAGTATGCTTCTGTGGTCGGGAGACAGCAGAACATTGCTCCTGATTGTAATGTCGTTTCTAGTAATTTCATCGCCAACAAGAAGCCTTCTTCCAAGAAGGATAGGCACAGCAAGATTTACACATCTCAGGGTTTGAGAGACCGACGGGTGAGATTGTCCATTGAGATCGCCCGCAAGTTCTTCGATCTGCAAGACATGTTAGGGTTCGACAAAGCCAGCAATACTCTTGACTGGCTCTTCACCAAGTCGAAGAAAGCAATTCAAGAGCTCGAAAAGGCAGCTCGAAGCAAGAAGAAAAGCAGCAGCACCAGCAAAACCACCAACAAGAGCTTCTCTTCTGCCTCTGAGAGCGAAGAGGTTGTTTCACCACAGAGGGTGGATTCAGATTCCGGCAAGGCGACAAGGCCAGAGATGGTGGAGAAGGCGAAGAAGGAGTCGAGGGAGAAGGCGAGGGCGAGGGCGAGGGAAAGGGCCAATCACAACAAGGGAAAGAGCTTAATGGTGATGTGTGGTGCTGAAACCAGTGAAACAATAAGAAGAGAAGAGCATAATAAGGAAATTGAAGAGTGTACTGTGATCAAAAGGAAGATGAAGCAGCCTTGTAATCTGATGAATTCTTCTAATCATCCCCAAAATCACTTTTTGATCCCTAATCACAAGGAAGCAAGTTTCACCAACAACACCACATTCATTAACACTACTTCTACTACTACTACTCATGACTACTCAATATTCCCTAATTTGACTCCAAATTGGGACACTAATGGGCGCTCCAATTTCTGTGCTATAGCCGATATGAATCTGTCGACAGATCTTCAAATCTATGGGAAGTCTTGGGAAGAGTGCAACAATCAGCGTCAACACTAG 1218 0.4425 MPSYSPLSLPSLCETFNFKVFTTQYAYHWESGPARELINMMFTPTNNNYSNYFFPSSSSSFPLLHHPSAFENNNASSSSLSSAAANVTFYHHDHLSSLPFIPSLIPEALTNSLAVPSEYASVVGRQQNIAPDCNVVSSNFIANKKPSSKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIQELEKAARSKKKSSSTSKTTNKSFSSASESEEVVSPQRVDSDSGKATRPEMVEKAKKESREKARARARERANHNKGKSLMVMCGAETSETIRREEHNKEIEECTVIKRKMKQPCNLMNSSNHPQNHFLIPNHKEASFTNNTTFINTTSTTTTHDYSIFPNLTPNWDTNGRSNFCAIADMNLSTDLQIYGKSWEECNNQRQH 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2492 405 ProSiteProfiles R domain profile. 261 281 IPR017888 -
Alju02g2492 405 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 115 338 IPR005333 GO:0003700
Alju02g2492 405 Pfam TCP family transcription factor 148 279 IPR017887 -
Alju02g2492 405 MobiDBLite consensus disorder prediction 217 238 - -
Alju02g2492 405 ProSiteProfiles TCP domain profile. 149 207 IPR017887 -
Alju02g2492 405 MobiDBLite consensus disorder prediction 239 275 - -
Alju02g2492 405 MobiDBLite consensus disorder prediction 210 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2492 Alju-ChrAlju02 27430774 27432490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2492 90 372 TCP Transcription Factor Family AT1G67260 31.410 1.30e-30 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju02g2492 TCP 2.1e-39 No_clan