Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2461 ATGGCGTCGGCTTCTCCTTCTCCCAATTCTTCCCCTTCTGCAGTGCCACCAACTTCTGCGAATAACACAATACCACCACCTTCTTCACCTTTATCTACAAATTCTTCTAAGACTCCTCCTTCATCTCCTAACCCTTCAGCTAAACCTCCTTCTCCGGTAGTGCCTTCAACTCCGCCTCCTTCTCCGTCTATTTCTCCTCCGCCGCCATCACCCTCGGATTCTCCACCGGCATCTCCTCCACGTTCAGCTCCCACAGCCCCTGCTCCAAATGCAACCTCACCAACCTCTCCGAGATCATCCCCACCACCTCCATTGGCTGCTTCACCACCAGATCCTTCACCTCCTCCTGCAGAAAATCCTCCTCCCTCACCTATTTCTCCAATTCCTCCTCCTCCGGCCAGTAACTCAACACCACCACCGTCTGGTAATCCTTCTCCGCCACGGGGAAAGCCACCGGAAAGTACTCCTTCGCCCCTTTCACCTGCACCATCTCCATCACTTTCTAAGTCTCCTCCTTCCAAGACGCCTTCAACTCCTTCAGTCCCTCCTCCAAAGTCTTCGCATACTCCTCCACATAATGCATCTGCAGTTAACAGGCCCCCTGCACCCCTACCCTCTTTTCCAAAGGCATCGCCCACTGATAGGTCATCTAATCATAGAAATACATCCACAACGAGCGCACCTTCAGGAGGAACAAATAATGGACTAGTGACAGTTATTGGCATTATAATTGGCTTTGTTATCCTCAGCTTTCTTGTCATGGCGGTGTGGTTTGTATGGAAACGGAAGAGGAAGGAAGCAAGACCGAAAGTTGGTTATACTACGCCTTCCCCTTATGCCTCATCTCATAACTCAGGCATAACGTTCTTAAGGCAACAGTCTTCCCTTTCTTATAATGGCGGAGGTAGTGATTTCACGTATTCACCATCCGAACCAGGTGGACTAAGTGGTTCAAGATCGTGGTTTACATATGAAGAACTTGTCCAAGCAACAGATGGGTTTTCGGCACAAAATCTGTTGGGTGAAGGCGGATTTGGTTGTGTCTACAAAGGCTTTCTCATGGATGGAAGAGCAGTAGCTGTGAAACAGCTCAAAGATGGAGGCGGGCAAGGGGAGCGTGAGTTTAGAGCAGAAGTTGAAACTATTAGCCGAGTACATCATCGCCACCTTGTTTCCTTGGTGGGCTACTGTATATCTGAGCATCAGAGATTGCTTGTCTATGACTATGTTCCCAACAATACCCTTCATTACCATCTCCATGGTCAAAACAGGCCAGTTATGGATTGGGCTACAAGAGTCAAGGTTGCAGTTGGTGCAGCACGTGGAATAGCTTACCTACATGAAGACTGCCATCCCCGCATTATTCACCGAGACATAAAGTCATCAAACATCCTTCTTGATAATAACTTTGAAGCTCAAGTTTCCGACTTTGGGCTTGCAAAATTAGCAATGGATTCATTTACACATGTAACCACACGAGTGATGGGGACCTTCGGGTACATGGCGCCAGAATATGCAACAAGTGGAAAACTGACTGAAAAGTCAGATGTTTATTCATTTGGGGTTGTGCTTTTGGAGCTAATTACGGGTCGGAAGCCTGTAGATGCCTCTCAGCCCACTGGTGATGAGAGCCTGATTGAATGGGCTCGACCTCTATTGAATCAAGTGCTTGATAATGAAGACTATGATATACTGGTAGATCCACGACTTGAGAAGAACTATAATAGAAATGAAATGTTTCGGATGATAGAGGCTGCAGCTGCCTGTGTGCGTCACTCTGCTGCAAAAAGACCTAGAATGAGTCAGGTCGCGAGAGCTTTAGATTCTATAGATGAGTTTTCGGATCTCTGTCATGGAATAAAACCTGGCCAGAGTACAACCTTTAATCCTTCACCACCATCTGCACAAGTCAGAATGTTTCAAAGGATGGTTTTCGGTGGGGCCAGTCAAGGTTTCAGTTCCAGTTTCTTTAACGATTCTCAGAGCAGCTGGAGAAGCAGAGACCAGGAGGACTCAACACAACATGATCTCCCAAAATAA 2040 0.4735 MASASPSPNSSPSAVPPTSANNTIPPPSSPLSTNSSKTPPSSPNPSAKPPSPVVPSTPPPSPSISPPPPSPSDSPPASPPRSAPTAPAPNATSPTSPRSSPPPPLAASPPDPSPPPAENPPPSPISPIPPPPASNSTPPPSGNPSPPRGKPPESTPSPLSPAPSPSLSKSPPSKTPSTPSVPPPKSSHTPPHNASAVNRPPAPLPSFPKASPTDRSSNHRNTSTTSAPSGGTNNGLVTVIGIIIGFVILSFLVMAVWFVWKRKRKEARPKVGYTTPSPYASSHNSGITFLRQQSSLSYNGGGSDFTYSPSEPGGLSGSRSWFTYEELVQATDGFSAQNLLGEGGFGCVYKGFLMDGRAVAVKQLKDGGGQGEREFRAEVETISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHGQNRPVMDWATRVKVAVGAARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLAMDSFTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPTGDESLIEWARPLLNQVLDNEDYDILVDPRLEKNYNRNEMFRMIEAAAACVRHSAAKRPRMSQVARALDSIDEFSDLCHGIKPGQSTTFNPSPPSAQVRMFQRMVFGGASQGFSSSFFNDSQSSWRSRDQEDSTQHDLPK 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2461 679 FunFam Proline-rich receptor-like protein kinase PERK8 306 409 - -
Alju02g2461 679 ProSiteProfiles Protein kinase domain profile. 334 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2461 679 MobiDBLite consensus disorder prediction 1 18 - -
Alju02g2461 679 MobiDBLite consensus disorder prediction 1 234 - -
Alju02g2461 679 MobiDBLite consensus disorder prediction 25 41 - -
Alju02g2461 679 MobiDBLite consensus disorder prediction 210 234 - -
Alju02g2461 679 SUPERFAMILY Protein kinase-like (PK-like) 312 607 IPR011009 -
Alju02g2461 679 MobiDBLite consensus disorder prediction 656 679 - -
Alju02g2461 679 FunFam proline-rich receptor-like protein kinase PERK8 410 622 - -
Alju02g2461 679 Pfam Protein tyrosine and serine/threonine kinase 337 606 IPR001245 GO:0004672|GO:0006468
Alju02g2461 679 PRINTS Proline rich extensin signature 23 39 - -
Alju02g2461 679 PRINTS Proline rich extensin signature 42 59 - -
Alju02g2461 679 PRINTS Proline rich extensin signature 1 18 - -
Alju02g2461 679 PRINTS Proline rich extensin signature 64 89 - -
Alju02g2461 679 Gene3D Phosphorylase Kinase; domain 1 313 409 - -
Alju02g2461 679 MobiDBLite consensus disorder prediction 664 679 - -
Alju02g2461 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Alju02g2461 679 MobiDBLite consensus disorder prediction 42 189 - -
Alju02g2461 679 Gene3D Transferase(Phosphotransferase) domain 1 410 618 - -
Alju02g2461 679 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 248 650 IPR047117 -
Alju02g2461 679 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Alju02g2461 679 SMART serkin_6 334 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2461 Alju-ChrAlju02 26336939 26343074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2461 208 669 Trihelix Transcription Factor Family AT5G38560 66.737 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju02g2461 PK_Tyr_Ser-Thr 7.1e-47 CL0016