Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2430 ATGGCGATTCTGGAGCGACTAGTGAGGACTTCTCGGCTATGGCGTTCAATTTCATCTCTCAAAACCCTAACTCCTTCTGCTTGCTCGCGCCACATTACCCGCCCTTTCTCTCACAAGTCTGCGTTTTCGTCTGAGGTTTTCCGTTCGAGAGGTCTACCTGATGCTGCTGGACCGTATTCATTGTTTCCAGTTGTATTAGCCGGTATTTTTGGGGTTGGAGTTCTAGAAATGGCATATGCAGATGCTAATGAGTCTGCAGATGAGAGTCGGAAAGAGACTGCCCAGTCTGTACCTTCCTCATCACCAGCCTTGCCTTCAAGTAATGAGGATTTGGAAGGAGTTGCCAAGAAATTACGGTCCCAAATAATGCTGAAACTTGTAAATAGAGGAATTTCAGCTGCTTCTCATCCTGATTTCACCGTTTCTGTTAAAGGTCAAAAGGTCAGCATCAGGTTCCAAATTCCTCCTGCATGTGAAGTTTCCCATCTTCTTGCCAATCTTGTTTCCCAACTTGGAGCGAAGACTGAAGAGAATGGGGGTGGTTCGGACATGTTAATCCGTGCTTGGGACAGCACTGTTGCATGGCAACTTACCCTTAGTCGTCCCCCAAAGCAAAAGGATATACAAGGGAATCCAAGTGATGACGATCTATGCATACTCATATATTATCCTATCATCAGCCCTGACAAAGCTGAGATTGAATTCATTAAGCATGGGAGCCTGAGTACTGAAGAGCTTGATGCTTTTGTATCCATTTTAGAAATAGCTGGCAAAAAGTTGGGACAAAGAAGAACCCCATATAGGAGACCAAGGGGAGAGACAGAAAAGGTTCCATCTGTTGATAAATCTATAGCAGATCTTGGATCAATGGGAGTCAGAATTTATGGGCTCAATGAACCTCAAACAGGTATCTCAAATGGTGAGATGTCTTGGGACAACATTGCCGGTTATGCTAACCAGAAACGAGAAATAGAAGATACAATACTATTAGCTTTACAAAGACCTGAAGTATATGATGATATTGCTCGTGGGACTCGTCATAAGTATGAAACAACCAGGCCACGAGCTGTGCTCTTTGAAGGTCCACCAGGTACAGGGAAAACCTCTTGTGCTCGTGTTATAGCTAGTCAAGCGGGTGTCCCATTGCTGTATGTACCTCTGGAGGTAGTCATGTCCAAATACTACGGTGAAAGTGAGCGCTTGCTTGGAAAAGTTTTTTCTCTTGCGAACGAACTTCCCAAGGGTGCTCTTATTTTTCTGGATGAGATTGATTCCTTTGCTGCTGCCCGTGATAGGGAAATGCATGAAGCTACACGCAGGATATTGTCAGTCTTGTTGCGTCAGATTGATGGGTTTGAACAGGATAAGAAAGTGATTGTCATCGGTGCTACAAACAGAAAGCAAGACCTTGATCCAGCATTAATCAGTCGGTTTGATACTATGATCACTTTTGCCCTACCTGATCATGATAACCGTAAGGAAATAGCAGCCAAATATGCCAAACATCTTACAAAACCAGAATTAGATGAACTTGCAAGAGTTACAGAAGGTATGTCTGGAAGAGACATCAGAGATGTTTGTCTGCAAGCTGAAAGGTCCTGGGCATCAAAGATTATTCGAGGAAAAGTGTCTAAAGATGGAGATGAAGCTTGTCTTCCACCTCTGCAAGAATATAAGGATAGTGGCTCCAATAGGCGAAAAGCTTTGCTTGGTGCCGCAGCAAATCAGAAATTCCGAAGTTATCCCAATGGCGAAGGAAGCCAGCTAGATCTGATTTGA 1779 0.4396 MAILERLVRTSRLWRSISSLKTLTPSACSRHITRPFSHKSAFSSEVFRSRGLPDAAGPYSLFPVVLAGIFGVGVLEMAYADANESADESRKETAQSVPSSSPALPSSNEDLEGVAKKLRSQIMLKLVNRGISAASHPDFTVSVKGQKVSIRFQIPPACEVSHLLANLVSQLGAKTEENGGGSDMLIRAWDSTVAWQLTLSRPPKQKDIQGNPSDDDLCILIYYPIISPDKAEIEFIKHGSLSTEELDAFVSILEIAGKKLGQRRTPYRRPRGETEKVPSVDKSIADLGSMGVRIYGLNEPQTGISNGEMSWDNIAGYANQKREIEDTILLALQRPEVYDDIARGTRHKYETTRPRAVLFEGPPGTGKTSCARVIASQAGVPLLYVPLEVVMSKYYGESERLLGKVFSLANELPKGALIFLDEIDSFAAARDREMHEATRRILSVLLRQIDGFEQDKKVIVIGATNRKQDLDPALISRFDTMITFALPDHDNRKEIAAKYAKHLTKPELDELARVTEGMSGRDIRDVCLQAERSWASKIIRGKVSKDGDEACLPPLQEYKDSGSNRRKALLGAAANQKFRSYPNGEGSQLDLI 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2430 592 CDD RecA-like_protease 342 484 - -
Alju02g2430 592 MobiDBLite consensus disorder prediction 86 110 - -
Alju02g2430 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 309 533 IPR027417 -
Alju02g2430 592 Gene3D - 487 541 - -
Alju02g2430 592 SMART AAA_5 353 488 IPR003593 GO:0016887
Alju02g2430 592 ProSitePatterns AAA-protein family signature. 458 477 IPR003960 GO:0005524|GO:0016887
Alju02g2430 592 Pfam ATPase family associated with various cellular activities (AAA) 357 484 IPR003959 GO:0005524|GO:0016887
Alju02g2430 592 MobiDBLite consensus disorder prediction 92 107 - -
Alju02g2430 592 Gene3D - 308 486 IPR027417 -
Alju02g2430 592 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 307 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2430 Alju-ChrAlju02 25436261 25442874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2430 308 530 Calmodulin-binding Proteins AT3G56690 32.759 3.33e-27 115