Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2421 ATGGCTGCCACTTGTGTGGCTTCTTCTCTGTTTCTTCCAATCGCCTTGATCTTTGCTGCTCTTCATCTTTCTTTAGCCAACACTGACGCTACTGATGTTCAAGCGCTTGAAGTTTTGTACAACGCTTTAAACAGCCCTTCTTGGCTAACTGGCTGGAAAATTGGTGGTGGTGATCCTTGTGGAGAGGCTTGGAAAGGGATAACATGTGAGGGCTCAGCCGTTGTTTCCATAGAATTGTCAGGTTTGGGACTTAATGGGACTCTGGGATACCTGCTTTCAGACCTTATGTCACTGAGACAACTTGACTTGAGTGACAACAAGATCCACGACACGGTCCCATACCAATTGCCGCCAAATCTGACAAGCCTGAACCTTGCAAGAAATAACTTGAGTGGAAATCTTCCTTATTCTATTTCTGCCATGACTTCCCTCAATTATCTGAATGTGAGCCACAATGCACTCTCCCTTTCAATTGGAGACATTTTTGCTAACCTTGCTGATCTCAGTACCCTGGATCTATCGTTCAACGGCTTTTCTGGAGATCTCCCTCCCTCATTTGGTTCATTGTCCAATCTTTCTTCTGCCTTTTTGCAGAACAATCAGTTGACTGGTTCACTTAGTGTTCTTGTTGGCTTGCCTTTAAATGCTCTAAATGTCGCAAACAACAACTTCTCTGGATGGATACCTCGTGAACTTAGTTCAATTCGTAATTTCATATCTGATGGAAATTCCTTTGACAATGGGCCTGCTCCTCCTCCTCCTCCTCCACATACAGCCCCTTCTCCCAGAAGATCTAGGCATCACCGTTCTGGATCTGGCTCTAATAAAGCACATGCTTCTGAATCTGACAATGAAGCTGCTGTCAGCCATAATGGCTTATCATCTGGGGCTATTATAGGCATTGTTCTGGGTTCAATTTTCCTAGCCATTGTTGTGCTACTTGCTCTTGCCTTATGTATCCGAAAGCGTAAAAGGAAGGAAAAAGGTGTCAGAACATCCAATGGGAATCCTCCTCTTGGAACCAATAATGTGACTCTTCCGATGCAAGAACAGAGGGTAAAAAGTGCTGCTGCTGTTGTAACAGATCTGAAGCCGCCTCCTGCAGAAAAAGTGATAGCTGAGAGGGTTCCTTCGAAAAATGGATCCGTTAAGCGGATAAAATCCCCTATAACTGCTACATCATACACAATTGCTACTCTCCAAAGTGCAACGAATAGCTTCAGTCAAGAATTTATTATCGGTGAAGGTTCTCTTGGTCGAGTTTACAGGGCCGAATTCCCTAATGGGAAGATCATGGCCATTAAGAAGATCGACAATGCAGCGCTGTCATTACAGGAGGAAGACAACTTTCTTGAAGCTGTATCAAACATGTCACGCTTGCGCCATCCAAACATTGTTACACTAGCCGGATACTGTGCAGAGCATGGGCAGCGTCTTCTCGTTTATGAGTATATTGGTAGTGGAAATCTACATGATATGCTCCACTTTACTGAAGATAGTAGCAAGGCTTTATCTTGGAATGCTCGTGTTCGAATAGCACTTGGCACTGCTCGAGCTTTAGAGTACTTGCATGAAGTATGCTTGCCTTCTGTTGTACATAGAAACTTTAAATCGGCAAACATATTACTTGATGAGGATTTGAATCCTCAATTGTCTGATTGTGGTTTAGCTGCTTTAACGCCAAACACGGAACGGCAGGTTTCAACCCAGATGGTTGGCTCATTTGGTTATAGTGCTCCTGAGTTTGCGCTATCAGGAATATACACAGTAAAAAGTGATGTTTACAGTTTTGGAGTGGTAATGTTAGAGCTATTGACGGGTCGGAAGCCACTTGACAGTTCACGAGCGAGAACAGAGCAATCACTTGTGAGATGGGCTACTCCCCAACTTCATGATATAGATGCCTTGGCCAAAATGGTTGATCCTGCTTTGAATGGCATGTATCCTGCGAAGTCACTGTCACGCTTTGCCGATATCATTGCCCTCTGTGTTCAGCCGGAGCCTGAATTTCGACCTCCCATGTCTGAGGTTGTGCAAGCATTGGTTCGGCTAGTGCAAAGAGCGAGCATGGTCAAACGCCGCCCCAGCGACGAATCTGGGTTTGGTCACAAGACCCCAGATCATGAAGCCTTTGACATGTCATTTTAA 2148 0.4474 MAATCVASSLFLPIALIFAALHLSLANTDATDVQALEVLYNALNSPSWLTGWKIGGGDPCGEAWKGITCEGSAVVSIELSGLGLNGTLGYLLSDLMSLRQLDLSDNKIHDTVPYQLPPNLTSLNLARNNLSGNLPYSISAMTSLNYLNVSHNALSLSIGDIFANLADLSTLDLSFNGFSGDLPPSFGSLSNLSSAFLQNNQLTGSLSVLVGLPLNALNVANNNFSGWIPRELSSIRNFISDGNSFDNGPAPPPPPPHTAPSPRRSRHHRSGSGSNKAHASESDNEAAVSHNGLSSGAIIGIVLGSIFLAIVVLLALALCIRKRKRKEKGVRTSNGNPPLGTNNVTLPMQEQRVKSAAAVVTDLKPPPAEKVIAERVPSKNGSVKRIKSPITATSYTIATLQSATNSFSQEFIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIGSGNLHDMLHFTEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEDLNPQLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRARTEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASMVKRRPSDESGFGHKTPDHEAFDMSF 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2421 715 Pfam Protein kinase domain 410 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2421 715 MobiDBLite consensus disorder prediction 243 286 - -
Alju02g2421 715 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 256 - -
Alju02g2421 715 ProSiteProfiles Leucine-rich repeat profile. 97 118 IPR001611 GO:0005515
Alju02g2421 715 ProSiteProfiles Protein kinase domain profile. 407 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2421 715 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 684 IPR046959 -
Alju02g2421 715 MobiDBLite consensus disorder prediction 325 344 - -
Alju02g2421 715 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 485 695 - -
Alju02g2421 715 SUPERFAMILY L domain-like 31 237 - -
Alju02g2421 715 Pfam Leucine Rich repeat 96 110 IPR001611 GO:0005515
Alju02g2421 715 Gene3D Ribonuclease Inhibitor 29 255 IPR032675 -
Alju02g2421 715 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Alju02g2421 715 Gene3D Phosphorylase Kinase; domain 1 369 484 - -
Alju02g2421 715 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Alju02g2421 715 CDD STKc_IRAK 413 684 - -
Alju02g2421 715 Gene3D Transferase(Phosphotransferase) domain 1 486 703 - -
Alju02g2421 715 SUPERFAMILY Protein kinase-like (PK-like) 384 681 IPR011009 -
Alju02g2421 715 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 373 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2421 Alju-ChrAlju02 25279727 25284821 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2421 141 715 Strubbelig Receptor Gene Family AT4G22130 71.924 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Alju02g2421 Pkinase 1.6e-44 CL0016