Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2412 ATGCTTCCTGGTTTGGGATTCCCGGTGAATCTTGGCCGTGTAATGGAATCCTCTGATAGTAATCGGAAGGTCCTCAGTGAAGTTGATTTCTTCTCTAACCCAACAAGCAAGCCGTCAGCACAAGAAATTCATCATCATCATCATCATCAAGATGTTAAAACCCTTTCCAATAATATCTCTGTCAAGAAGGAAATTCCTAAGACTCAACCGGTTTCTAGGTCTAACTTGGATATGAATATCGGTTTACAACTGCAAACTGGTAATACCAGGAGTGATCAATCTACGTTGGATGAACATGGCGTCTCGTCAGATGCAGACGATAAGCGAGCCAAAAGCAACGAGTTGAAACAACTGCAACAAGAGGTTCAGAGAATGAACACAGAAAACCAGAACCTGAAAGAGATGCTGAGCCACATGAGCAATAACTACACCGCCCTGCAAATGCATCTCGCTGCATTAATCCAACAGCGACATCAACACAACCAACATGATCATCAGGTTGTTGGAAAAAGTGAGGAGAAAAATCAGGTGACGGCGAGGCAGTTTCTTGAACTTGGATCAGGTGATGATGACGCGTCCAATTCTAGTTCAGATGAAAGAACTCAATCTGCTTCACCTAATAATGGTAAAAGTGAGATGGGTGTAAGGGAAGAGAGTCCAGACTCAGAATCACAAAAGGCTTATGAGCTTCAGAAATTGAATCCTTCTTCTTCGAATTCCATAGTAGATCAATCCACTACTACTGCAACAACAGAAGCCACCATGAGAAAAGCTCGTGTCTCAGTCCGTGCTAGATCAGAAGCCCCCATGATCAGTGATGGCTGTCAATGGAGAAAATATGGCCAAAAAATGGCTAAAGGAAACCCATGTCCTCGCGCTTATTACAGATGCACCATGGCTGTTGGTTGTCCTGTTCGTAAACAAGTTCAGCGTTGTGCAGAAGACAAAACCATATTGGTAACAACGTACGAAGGAAGTCATAACCATCCATTGCCACCGGCGGCCATGGCGATGGCTTCAACGACAAGTGCAGCGGCGGGAATGTTACTGTCTGGTTCAATGTCAAGTCCAGAAGGGTTGATGAAGATGAACCCTATGTTAGCAAGAGCCATTCTTAACTCTTCTTGTTCTTCAACCATGGCTACTCTCTCGGCTTCAGCTCCTTTCCCTACTGTCACATTGGACCTAACTCACAACATCAACAACGACAATAATATCAACAACGCAATGCTGCATCAGTTTCAAGTTCACCGCTCTAATGCTATGCCGTTTCATCAGCTTGTTCAACCATTGTATAACCAGTCCAAGTTTTCTGGCCTTCAGTTGTCACAGGATAGGCCAGTTCATCAGCAGTCTTCTACTCCAGCTGATACCATCGGTAACGCCGCCGCAGCCCTCACAGCCGACCCGAACTTCACGGCGGCTCTCGCGGCTGCTATCTCTTCCATTATCCGTGGTAATGATCATCAGAACAACAACGGTGGTAGCAGCAGCAATCCAAATATCCTCAACAGTACTTCAATCAGCAGCTTTTCTGGGAATTAA 1545 0.4511 MLPGLGFPVNLGRVMESSDSNRKVLSEVDFFSNPTSKPSAQEIHHHHHHQDVKTLSNNISVKKEIPKTQPVSRSNLDMNIGLQLQTGNTRSDQSTLDEHGVSSDADDKRAKSNELKQLQQEVQRMNTENQNLKEMLSHMSNNYTALQMHLAALIQQRHQHNQHDHQVVGKSEEKNQVTARQFLELGSGDDDASNSSSDERTQSASPNNGKSEMGVREESPDSESQKAYELQKLNPSSSNSIVDQSTTTATTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGSHNHPLPPAAMAMASTTSAAAGMLLSGSMSSPEGLMKMNPMLARAILNSSCSSTMATLSASAPFPTVTLDLTHNINNDNNINNAMLHQFQVHRSNAMPFHQLVQPLYNQSKFSGLQLSQDRPVHQQSSTPADTIGNAAAALTADPNFTAALAAAISSIIRGNDHQNNNGGSSSNPNILNSTSISSFSGN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2412 514 Coils Coil 108 142 - -
Alju02g2412 514 FunFam probable WRKY transcription factor 31 256 333 - -
Alju02g2412 514 MobiDBLite consensus disorder prediction 226 255 - -
Alju02g2412 514 MobiDBLite consensus disorder prediction 86 112 - -
Alju02g2412 514 MobiDBLite consensus disorder prediction 33 73 - -
Alju02g2412 514 SMART WRKY_cls 271 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju02g2412 514 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 77 497 IPR044810 GO:0003700
Alju02g2412 514 MobiDBLite consensus disorder prediction 172 212 - -
Alju02g2412 514 MobiDBLite consensus disorder prediction 54 73 - -
Alju02g2412 514 Gene3D WRKY domain 256 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju02g2412 514 MobiDBLite consensus disorder prediction 97 112 - -
Alju02g2412 514 MobiDBLite consensus disorder prediction 155 265 - -
Alju02g2412 514 ProSiteProfiles WRKY domain profile. 266 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju02g2412 514 SUPERFAMILY WRKY DNA-binding domain 264 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju02g2412 514 Pfam WRKY DNA -binding domain 273 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju02g2412 514 MobiDBLite consensus disorder prediction 490 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2412 Alju-ChrAlju02 25116180 25118799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2412 7 494 WRKY Transcription Factor Family AT1G62300 51.321 6.47e-144 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju02g2412 WRKY 5.1e-24 CL0274