Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2410 ATGAACTGGTCTAGGGGTCCCACCATTGGCCGGGGTGCCACCGCCACCGTCTCTATTGCCCATGATCGCCGATCCGGTCGCTTGTTCGCGGTCAAGTCGGCTGAGCTCAACCGATCCGAGTTGCTGCAAAGGGAACAGAAAATTCTGTCCACATTGATATCTCCTCACATAGTAGCATACCAAGGATGTGACGTTACGTTAGAGAGTAACCTACAGTGGTACAATCTGATAATGGAGTATGCACCTTATGGCACGCTGGCCGACATGGCTCGCCGGCGAGACGGGCTAGAGGAGGCGGTGGTTCGAACCTATGCGCGCCAAATCTTACTGGGGCTTGACCATCTTCATTCTAATGGCATAATGCATTGTGATATTAAAGGTAAGAATGTTTTGGTGACGGAGGAAGGGGCTAAAATTGCAGACTTGGGTTGTGCTCGGAGGGTGTCTGAGGCCGCGGGTTACGGCGGAGTGGTTGCCGGCACACCAGTGTTCATGGCGCCGGAGGTGGCGCGTGGGGAGCAACATGGGTTCGCCGCCGACGTCTGGTCTCTGGGTTGTACTGTATTGGAGATGATCACCGGGCGGACTCCCTGGCCGGATGTATCTGACCCGGTAAGTGCGATTTATCGAATCGGGTTCAGCGGCGATGTGCCGGAGATTCCTGGGTTCATGTCGGATCAAGGGAGGGACTTTGTGAGTAAGTGTCTGAAGAGAGACCGGAATGATCGGTGGTCCGTGAGCGAACTCCTCCGACATGAGTTTGTGGAAGAATCAATTTCATCCATGAAAGAATTTGGAAGCTCGAAGTCGGATACTCCAACGGGTGTAATGGATGGATCCATCTGGGATTCGTGGGAGCCCACCCAAGATCCGACCCGTATTCGCTCCTGCAATTCTGGCAGAGACCGGATTCGCAGGTTGTGCACAGAAGCTACGACGTCGTTTGACGGCAATGAGCCCAACTGGGAATGGGAAGGAGAGTGGATCACAGTGAGAAACAGCAATGTGACAAAAGAGAATTACAATATTGACCTTGGAAATGAGACTAGTTTGGTGCATTGTTATGAACCTAAAACAGTAATTACCGTTGGGATGTGTCTATGTAATTGTAATGTCAATTGTAAGGTTAATGGTTGTAACAAAGGATTATTGTTAGGTTATTATGATTGGTCATGTGTAAGAATTATTGTTCGGAAAAGGAAAATTGAATCTCAAAATAAGGAAATAATTGTTCATGATTTGCTTCTGTCTCTTGCTCTCTCTAGAGACATCATGGGTTATAATGGTTTCACATGCGGCCAACACAAATCATAA 1314 0.4909 MNWSRGPTIGRGATATVSIAHDRRSGRLFAVKSAELNRSELLQREQKILSTLISPHIVAYQGCDVTLESNLQWYNLIMEYAPYGTLADMARRRDGLEEAVVRTYARQILLGLDHLHSNGIMHCDIKGKNVLVTEEGAKIADLGCARRVSEAAGYGGVVAGTPVFMAPEVARGEQHGFAADVWSLGCTVLEMITGRTPWPDVSDPVSAIYRIGFSGDVPEIPGFMSDQGRDFVSKCLKRDRNDRWSVSELLRHEFVEESISSMKEFGSSKSDTPTGVMDGSIWDSWEPTQDPTRIRSCNSGRDRIRRLCTEATTSFDGNEPNWEWEGEWITVRNSNVTKENYNIDLGNETSLVHCYEPKTVITVGMCLCNCNVNCKVNGCNKGLLLGYYDWSCVRIIVRKRKIESQNKEIIVHDLLLSLALSRDIMGYNGFTCGQHKS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2410 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Alju02g2410 437 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Alju02g2410 437 Pfam Protein kinase domain 6 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2410 437 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2410 437 MobiDBLite consensus disorder prediction 264 283 - -
Alju02g2410 437 Gene3D Transferase(Phosphotransferase) domain 1 2 289 - -
Alju02g2410 437 SUPERFAMILY Protein kinase-like (PK-like) 2 268 IPR011009 -
Alju02g2410 437 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2410 437 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 334 - -
Alju02g2410 437 CDD STKc_MAPKKK 2 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2410 Alju-ChrAlju02 25091051 25092364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2410 1 332 MAP Kinase Kinase Kinase AT4G26890 48.851 4.24e-101 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Alju02g2410 Pkinase 1.1e-54 CL0016