Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2376 ATGGAGTCCAGAGTGATTGTTCTTCACACCTTCGCCCAGACAGGTCTCTTGGTTTTTGATGTAGCTCAGGAATTAGGAATGATGAGTGAAGGTTATGTCTGGATATCTTCTTCTTGGTTATCAACTGTTTTAGACTCAAATTCAACAATTCATTTGAATAATTCTTACTCAATCCAAGGAGTTCTTACGCTTCGCCCTCACACACCGCAATCAAAAAGAAAACAGGCCTTTATGTCCAGGTGGAACCAGATAAGTAATGGTTCAGTTGGGTTGAATCCATATGGACTCTATGCTTATGATTCTGTTTGGATCATTGCCCTTGCATTGAAATCATTTTTTGATCAGAATGGCAATCTTTCATTCTCTAACAATACAAATTTAAACAGAATGAGAGGGGAGACTCTGGATCTTGGTGCACTGAGCGTTTTTAATGGAGGGAGACAATTGCTTGATAACATACTGCGCATTAACATGACTGGATTGACAGGACCTATTCAATTTCATCCAGATAGATCCCCCTTAAATCCATCATATGACGTCCTAAATGTAATTAATAGTAGTCATTATACGAAAGTCGGGTACTGGTCTAATTATTCTGGGCTATCTGTTATTCCTCCTGAGAAACTTCACACTAAGCGAGCCAACCGATTAATTTTAAACCAACATCTGTCCAATATAACTTGGCCTGGTGGTACAACAGAAAAGCCTCGGGGATGGGTTTTTCCAAATAATGGAAGACAGCTAAGAATTGGTGTCCCCAATCGAGTTAGTTATCAGAACTTGGTCTCACAAATAAATGGTACCAACAAAGTTCAAGGATACTGCATAGATGTCTTCATGGCTGCCATCAAATTGCTACCATATGCAGTTCCATACAAGTTTGTTCTGTTTGGAGATGGACATGAGAACCCCAACTACTTTGAACTTGTCAATGAGATTAATTCTGATGTGTTTGATGCTGCTGTAGGTGACATTGCCATTGTTACTGACCGAACAAGGATTGTGGATTTTACTCAACCATATACAGAGTCAGGCCTTGTTGTGGTTACAAAAGTAAAAGAATTAAAGTCAAGTGCTTGGAATTTCTTGCGACCTTTTACTCCATCAATGTGGGGCGTCACAGCTGTTTTCTTCCTCATTGTTGGAGCAGTTGTGTGGATTCTTGAACATAGAACAAATGATGAGTTCCGAGGGCCTCCTAGGAAACAAATTGCTACAATTCTTTGGTTTAGCCTCTCCACCATGTTTTTTGCACACAGAGAGAACACAGTTAGTGCACTTGGTCGTATAGTACTAATCATCTGGCTTTTCGTGGTTTTGGTAATCAATTCAAGCTATACTGCAAGCTTAACATCAATCCTCACTGTGCAACAACTTTCCTCACCAATAACAGGAATTGATACCTTGATAACCAGTAACAAACGTATAGGATTTCAAGTAGGATCATTTGCTGAAAACTATCTTTCTCAGGAACTCAACATCCCAAAATATAGACTTGTTCCTCTTGGTTCACCAGAAGAATATGCCATTGCTCTTGAGAGGGGAACTGTCGCGGCTGTTGTTGATGAACGGCCATATGTAGAACTCTTCATGTCAAATTACTGCAAATTCTCCATTAGAGGCCAAGAATTCACCAAAAGTGGATGGGGATTTGCCTTCCGAAAGGACTCCCCTTTATCCATTGATATGTCAACTGCCTTACTGACTCTGTCTGAAAATGGTGAGCTCCAGAAGATTCATAAGAGGTGGCTGTCAACACAGGCTTGTGCATTTAAGAGTGCAGAGGGATCTGAGCAACTTCAGTTAGAAAGCTTTTGGGGCCTGTTTCTGTTATGTGGGATAGTAAGTTTCCTAGCGCTTCTTGTCTATTTCATCTTGATGGTTCTCCAATTCTGCCGTGACTTCCCCAAAAATGGCGGTCCTTCTAACGGTAGCAGCTCGCACTCTGCTCGCATCCAGACATTTCTAAGTTTTGCTGATGAAAAAGAAGACATGTCACAAAGAAAGCTTAAGAGAAAACGCAAGGATTTTTCATAG 2037 0.4065 MESRVIVLHTFAQTGLLVFDVAQELGMMSEGYVWISSSWLSTVLDSNSTIHLNNSYSIQGVLTLRPHTPQSKRKQAFMSRWNQISNGSVGLNPYGLYAYDSVWIIALALKSFFDQNGNLSFSNNTNLNRMRGETLDLGALSVFNGGRQLLDNILRINMTGLTGPIQFHPDRSPLNPSYDVLNVINSSHYTKVGYWSNYSGLSVIPPEKLHTKRANRLILNQHLSNITWPGGTTEKPRGWVFPNNGRQLRIGVPNRVSYQNLVSQINGTNKVQGYCIDVFMAAIKLLPYAVPYKFVLFGDGHENPNYFELVNEINSDVFDAAVGDIAIVTDRTRIVDFTQPYTESGLVVVTKVKELKSSAWNFLRPFTPSMWGVTAVFFLIVGAVVWILEHRTNDEFRGPPRKQIATILWFSLSTMFFAHRENTVSALGRIVLIIWLFVVLVINSSYTASLTSILTVQQLSSPITGIDTLITSNKRIGFQVGSFAENYLSQELNIPKYRLVPLGSPEEYAIALERGTVAAVVDERPYVELFMSNYCKFSIRGQEFTKSGWGFAFRKDSPLSIDMSTALLTLSENGELQKIHKRWLSTQACAFKSAEGSEQLQLESFWGLFLLCGIVSFLALLVYFILMVLQFCRDFPKNGGPSNGSSSHSARIQTFLSFADEKEDMSQRKLKRKRKDFS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2376 678 Gene3D - 66 175 - -
Alju02g2376 678 Gene3D - 510 591 - -
Alju02g2376 678 Gene3D - 243 358 - -
Alju02g2376 678 SMART AABind_6 247 587 IPR001638 -
Alju02g2376 678 Pfam Receptor family ligand binding region 2 184 IPR001828 -
Alju02g2376 678 SUPERFAMILY Periplasmic binding protein-like II 225 585 - -
Alju02g2376 678 CDD GluR_Plant 246 584 - -
Alju02g2376 678 FunFam Glutamate receptor 243 359 - -
Alju02g2376 678 Pfam Ligand-gated ion channel 586 614 IPR001320 GO:0015276|GO:0016020
Alju02g2376 678 Pfam Bacterial extracellular solute-binding proteins, family 3 266 585 IPR001638 -
Alju02g2376 678 Gene3D - 359 491 - -
Alju02g2376 678 Gene3D - 2 201 - -
Alju02g2376 678 SMART GluR_14 249 586 IPR001320 GO:0015276|GO:0016020
Alju02g2376 678 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 650 IPR015683 -
Alju02g2376 678 FunFam Glutamate receptor 359 489 - -
Alju02g2376 678 FunFam Glutamate receptor 485 588 - -
Alju02g2376 678 SUPERFAMILY Periplasmic binding protein-like I 3 240 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2376 Alju-ChrAlju02 24571711 24575190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2376 1 676 Ion Channels AT2G17260 62.737 0.0 895