Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2365 ATGGGTTGCTCCAATCTGACAATGTGGGTTTCTTCGAAACCTTCTTTATCCGATGCTTCTTCCCTCTCCTTCCGTGCTTCCCTTAACCCCTTTTTCCACATTCCTTCTCAGAACCCATCTCCTTCGCGATCCTCTGCAACGCAAATCCAGTGTGGTCTTCGTGAGCTCAGAGGCCGAATCGATTCTGTGAAGAACACCCAGAAAATCACTGAGGCCATGAAGCTCGTCGCCGCCGCAAAAGTCAGAAGAGCTCAAGAAGCTGTCGTTAATGGCAGACCTTTCTCTGAGACCCTTGTCGAAGTCCTTTACAACATCAACGAGCAGCTCCAAACTGAAGACGTCGATGTTCCCCTCACAAAAGTTCGGCCTGTTAAGAAGGTGGCTTTGGTTGTTTGTACTGGAGATCGAGGTCTCTGTGGGGGTTTCAATAACCAAATCATTAAAAAAGCTGAAGCAAGAATCGCAGAATTGAAGGATCTGGGTCTTGATTATACCGTCATTAGCGTTGGGAAAAAGGGTAATTCGTATTTCCTTCGCAGGCCTTATATCCCAGTGGATAGATTTCTCGAACAAGGAACTCTTCCAACTGCAAAAGAAGCTCAAGCCATTGCTGATGATGTTTTCTCTTTATTTATAAGTGAAGAGGTTGATAAGGTTGAGTTGTTATACACAAAATTTGTGTCTTTGGTGAAATCCGATCCTGTGATTCATACTCTACTTCCTCTGTCACCAAGAGGAGAGATCTGTGATGTGAATGGTGTCTGTGTGGATGCTGCTGAAGATGAGTTCTTTAGGTTGACCACAAAGGAAGGAAAGTTGACTGTTGAGAGAGATGTTATGAGGACCAAGACAGACGATTTCTCCCCAATTTTGCAGTTTGAGCAGGACCCAGTTCAGATTCTAGATGCCTTATTGCCTCTGTACTTGAATTCTCAGATTCTTAGAGCATTGCAGGAGTCACTTGCCAGTGAGCTTGCTGCTAGAATGAGTGCTATGAGCAATGCTACCGATAACGCTGTGGAATTGAAGAAGAACTTGTCAAGAATATACAACAGGGAACGTCAAGCCAAGATCACTGGTGAAATTCTGGAAATTGTTGCTGGTGCCAATGCCCTAACATAG 1122 0.4465 MGCSNLTMWVSSKPSLSDASSLSFRASLNPFFHIPSQNPSPSRSSATQIQCGLRELRGRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVCTGDRGLCGGFNNQIIKKAEARIAELKDLGLDYTVISVGKKGNSYFLRRPYIPVDRFLEQGTLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVMRTKTDDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNAVELKKNLSRIYNRERQAKITGEILEIVAGANALT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2365 373 FunFam ATP synthase gamma chain, chloroplastic 120 243 - -
Alju02g2365 373 Gene3D - 119 243 - -
Alju02g2365 373 FunFam ATP synthase gamma chain, chloroplastic 51 118 - -
Alju02g2365 373 NCBIfam ATP synthase F1 subunit gamma 52 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Alju02g2365 373 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 52 372 IPR035968 GO:0015986|GO:0045261|GO:0046933
Alju02g2365 373 PANTHER ATP SYNTHASE GAMMA CHAIN 5 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Alju02g2365 373 PRINTS ATP synthase gamma subunit signature 319 338 IPR000131 GO:0015986|GO:0045261|GO:0046933
Alju02g2365 373 PRINTS ATP synthase gamma subunit signature 124 143 IPR000131 GO:0015986|GO:0045261|GO:0046933
Alju02g2365 373 PRINTS ATP synthase gamma subunit signature 350 371 IPR000131 GO:0015986|GO:0045261|GO:0046933
Alju02g2365 373 PRINTS ATP synthase gamma subunit signature 217 234 IPR000131 GO:0015986|GO:0045261|GO:0046933
Alju02g2365 373 Coils Coil 332 352 - -
Alju02g2365 373 CDD F1-ATPase_gamma 53 369 IPR000131 GO:0015986|GO:0045261|GO:0046933
Alju02g2365 373 Hamap ATP synthase gamma chain [atpG]. 50 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Alju02g2365 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 52 118 - -
Alju02g2365 373 FunFam ATP synthase gamma chain, chloroplastic 269 372 - -
Alju02g2365 373 Pfam ATP synthase 53 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Alju02g2365 373 ProSitePatterns ATP synthase gamma subunit signature. 358 371 IPR023632 -
Alju02g2365 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 268 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2365 Alju-ChrAlju02 24396139 24397260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2365 24 372 Primary Pumps ATPases AT1G15700 70.506 5.35e-180 503